Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RPL39P62891 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RPL39P62891 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
RPL39P62891 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RPL39P62891 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
RPL39P62891 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC10.59□□□□□ -0.71
RPL39P62891 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
RPL39P62891 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
RPL39P62891 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
RPL39P62891 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
RPL39P62891 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 AC111170.3-201ENST00000624282 2464 ntBASIC10.58□□□□□ -0.72
RPL39P62891 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
RPL39P62891 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 AL137783.1-201ENST00000623494 1896 ntBASIC10.58□□□□□ -0.72
RPL39P62891 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
RPL39P62891 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 ZNF259P1-201ENST00000407656 1365 ntBASIC10.58□□□□□ -0.72
RPL39P62891 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
RPL39P62891 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
RPL39P62891 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC10.58□□□□□ -0.72
RPL39P62891 PRR29-209ENST00000582540 967 ntTSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC10.58□□□□□ -0.72
RPL39P62891 MIR6069-201ENST00000620069 79 ntBASIC10.58□□□□□ -0.72
RPL39P62891 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC10.58□□□□□ -0.72
RPL39P62891 LINC00628-201ENST00000628516 1289 ntBASIC10.58□□□□□ -0.72
RPL39P62891 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC10.58□□□□□ -0.72
RPL39P62891 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
RPL39P62891 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC10.58□□□□□ -0.72
RPL39P62891 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 AL731571.1-201ENST00000617058 5428 ntBASIC10.58□□□□□ -0.72
RPL39P62891 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
RPL39P62891 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC10.58□□□□□ -0.72
RPL39P62891 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RPL39P62891 AC023794.5-201ENST00000564380 2157 ntBASIC10.58□□□□□ -0.72
RPL39P62891 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
RPL39P62891 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.57□□□□□ -0.72
RPL39P62891 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.57□□□□□ -0.72
RPL39P62891 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC10.57□□□□□ -0.72
RPL39P62891 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC10.57□□□□□ -0.72
RPL39P62891 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
RPL39P62891 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC10.57□□□□□ -0.72
RPL39P62891 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RPL39P62891 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
RPL39P62891 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
RPL39P62891 YBX2P1-201ENST00000394192 760 ntBASIC10.57□□□□□ -0.72
RPL39P62891 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC10.57□□□□□ -0.72
RPL39P62891 AC005237.2-201ENST00000434368 219 ntBASIC10.57□□□□□ -0.72
RPL39P62891 AL591424.1-201ENST00000442569 1213 ntBASIC10.57□□□□□ -0.72
RPL39P62891 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms