Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDH13P55290 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH13P55290 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
CDH13P55290 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH13P55290 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH13P55290 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CDH13P55290 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH13P55290 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH13P55290 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH13P55290 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDH13P55290 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH13P55290 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CDH13P55290 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH13P55290 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH13P55290 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH13P55290 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDH13P55290 KLF2P2-201ENST00000416807 1039 ntBASIC14.61□□□□□ -0.07
CDH13P55290 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH13P55290 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.61□□□□□ -0.07
CDH13P55290 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH13P55290 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.61□□□□□ -0.07
CDH13P55290 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH13P55290 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 RFPL4AP1-201ENST00000530883 850 ntBASIC14.61□□□□□ -0.07
CDH13P55290 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH13P55290 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDH13P55290 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH13P55290 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH13P55290 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH13P55290 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
CDH13P55290 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDH13P55290 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH13P55290 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH13P55290 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH13P55290 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDH13P55290 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH13P55290 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDH13P55290 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CDH13P55290 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CDH13P55290 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH13P55290 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CDH13P55290 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH13P55290 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 EIF3FP3-201ENST00000434851 1086 ntBASIC14.6□□□□□ -0.07
CDH13P55290 AC114812.1-204ENST00000449669 728 ntBASIC14.6□□□□□ -0.07
CDH13P55290 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.6□□□□□ -0.07
CDH13P55290 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH13P55290 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 AC092552.1-201ENST00000547243 906 ntBASIC14.6□□□□□ -0.07
CDH13P55290 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH13P55290 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH13P55290 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH13P55290 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH13P55290 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
CDH13P55290 AC093726.1-201ENST00000608064 963 ntBASIC14.6□□□□□ -0.07
CDH13P55290 AC099568.2-201ENST00000609194 695 ntBASIC14.6□□□□□ -0.07
CDH13P55290 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms