Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA4P54764 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA4P54764 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.32□□□□□ -0.12
EPHA4P54764 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 AL645939.5-201ENST00000606834 243 ntBASIC14.32□□□□□ -0.12
EPHA4P54764 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.32□□□□□ -0.12
EPHA4P54764 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
EPHA4P54764 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA4P54764 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
EPHA4P54764 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA4P54764 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EPHA4P54764 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.32□□□□□ -0.12
EPHA4P54764 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
EPHA4P54764 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.31□□□□□ -0.12
EPHA4P54764 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA4P54764 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA4P54764 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA4P54764 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA4P54764 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.31□□□□□ -0.12
EPHA4P54764 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA4P54764 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
EPHA4P54764 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.31□□□□□ -0.12
EPHA4P54764 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA4P54764 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA4P54764 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.31□□□□□ -0.12
EPHA4P54764 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.31□□□□□ -0.12
EPHA4P54764 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.31□□□□□ -0.12
EPHA4P54764 MIR3619-201ENST00000579667 83 ntBASIC14.31□□□□□ -0.12
EPHA4P54764 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.31□□□□□ -0.12
EPHA4P54764 ACTG1P22-201ENST00000603793 1099 ntBASIC14.31□□□□□ -0.12
EPHA4P54764 AC090164.2-201ENST00000611487 516 ntBASIC14.31□□□□□ -0.12
EPHA4P54764 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.31□□□□□ -0.12
EPHA4P54764 AC027601.3-201ENST00000622907 509 ntBASIC14.31□□□□□ -0.12
EPHA4P54764 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.31□□□□□ -0.12
EPHA4P54764 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.31□□□□□ -0.12
EPHA4P54764 AC068587.10-201ENST00000641210 219 ntBASIC14.31□□□□□ -0.12
EPHA4P54764 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
EPHA4P54764 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA4P54764 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 TUBBP5-203ENST00000508529 1334 ntBASIC14.31□□□□□ -0.12
EPHA4P54764 AL008718.2-201ENST00000609206 1313 ntBASIC14.31□□□□□ -0.12
EPHA4P54764 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA4P54764 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
EPHA4P54764 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
EPHA4P54764 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.31□□□□□ -0.12
EPHA4P54764 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EPHA4P54764 AL109954.1-202ENST00000564051 2148 ntBASIC14.3□□□□□ -0.12
EPHA4P54764 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA4P54764 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA4P54764 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA4P54764 AC244394.1-201ENST00000435000 1665 ntBASIC14.3□□□□□ -0.12
EPHA4P54764 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA4P54764 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA4P54764 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA4P54764 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA4P54764 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.3□□□□□ -0.12
EPHA4P54764 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
EPHA4P54764 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA4P54764 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.3□□□□□ -0.12
EPHA4P54764 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.3□□□□□ -0.12
EPHA4P54764 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.3□□□□□ -0.12
EPHA4P54764 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA4P54764 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.3□□□□□ -0.12
EPHA4P54764 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
EPHA4P54764 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA4P54764 AC026740.1-201ENST00000607068 791 ntBASIC14.3□□□□□ -0.12
EPHA4P54764 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.3□□□□□ -0.12
EPHA4P54764 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms