Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.36■□□□□ 0.21
PMS1P54277 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PMS1P54277 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PMS1P54277 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.35■□□□□ 0.21
PMS1P54277 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.35■□□□□ 0.21
PMS1P54277 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.35■□□□□ 0.21
PMS1P54277 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 HMGN1P19-201ENST00000436976 333 ntBASIC16.35■□□□□ 0.21
PMS1P54277 AP001889.1-201ENST00000525414 633 ntBASIC16.35■□□□□ 0.21
PMS1P54277 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.35■□□□□ 0.21
PMS1P54277 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.35■□□□□ 0.21
PMS1P54277 ENPP7P14-201ENST00000621765 1040 ntBASIC16.35■□□□□ 0.21
PMS1P54277 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PMS1P54277 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.35■□□□□ 0.21
PMS1P54277 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.35■□□□□ 0.21
PMS1P54277 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PMS1P54277 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PMS1P54277 AC011474.4-201ENST00000623523 2076 ntBASIC16.34■□□□□ 0.21
PMS1P54277 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.34■□□□□ 0.21
PMS1P54277 MST1P2-201ENST00000457982 2291 ntBASIC16.34■□□□□ 0.21
PMS1P54277 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PMS1P54277 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 AC010327.5-201ENST00000586923 3061 ntBASIC16.34■□□□□ 0.21
PMS1P54277 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PMS1P54277 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PMS1P54277 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.34■□□□□ 0.21
PMS1P54277 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 RN7SL837P-201ENST00000463010 287 ntBASIC16.34■□□□□ 0.21
PMS1P54277 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 AP003171.2-201ENST00000528208 925 ntBASIC16.34■□□□□ 0.21
PMS1P54277 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.34■□□□□ 0.21
PMS1P54277 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.34■□□□□ 0.21
PMS1P54277 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.34■□□□□ 0.21
PMS1P54277 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PMS1P54277 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PMS1P54277 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PMS1P54277 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PMS1P54277 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.34■□□□□ 0.21
PMS1P54277 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.34■□□□□ 0.21
PMS1P54277 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PMS1P54277 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.33■□□□□ 0.21
PMS1P54277 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PMS1P54277 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms