Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
GBX2P52951 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GBX2P52951 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.35□□□□□ -0.27
GBX2P52951 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GBX2P52951 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GBX2P52951 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GBX2P52951 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GBX2P52951 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.34□□□□□ -0.27
GBX2P52951 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.34□□□□□ -0.27
GBX2P52951 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
GBX2P52951 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
GBX2P52951 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.34□□□□□ -0.27
GBX2P52951 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.34□□□□□ -0.27
GBX2P52951 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.34□□□□□ -0.27
GBX2P52951 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.34□□□□□ -0.27
GBX2P52951 DNAJB3-201ENST00000446806 729 ntBASIC13.34□□□□□ -0.27
GBX2P52951 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.34□□□□□ -0.27
GBX2P52951 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
GBX2P52951 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.34□□□□□ -0.27
GBX2P52951 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
GBX2P52951 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.34□□□□□ -0.27
GBX2P52951 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
GBX2P52951 AC004461.2-201ENST00000629517 803 ntBASIC13.34□□□□□ -0.27
GBX2P52951 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.34□□□□□ -0.27
GBX2P52951 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.34□□□□□ -0.27
GBX2P52951 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.34□□□□□ -0.27
GBX2P52951 AL109936.8-201ENST00000641772 604 ntBASIC13.34□□□□□ -0.27
GBX2P52951 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.34□□□□□ -0.27
GBX2P52951 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
GBX2P52951 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GBX2P52951 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
GBX2P52951 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.34□□□□□ -0.27
GBX2P52951 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.34□□□□□ -0.27
GBX2P52951 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GBX2P52951 AL137783.1-201ENST00000623494 1896 ntBASIC13.33□□□□□ -0.27
GBX2P52951 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GBX2P52951 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
GBX2P52951 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.33□□□□□ -0.27
GBX2P52951 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GBX2P52951 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
GBX2P52951 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GBX2P52951 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
GBX2P52951 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
GBX2P52951 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GBX2P52951 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
GBX2P52951 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GBX2P52951 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.33□□□□□ -0.28
GBX2P52951 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
GBX2P52951 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GBX2P52951 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.33□□□□□ -0.28
GBX2P52951 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GBX2P52951 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GBX2P52951 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GBX2P52951 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.33□□□□□ -0.28
GBX2P52951 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.33□□□□□ -0.28
GBX2P52951 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms