Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDK7P50613 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CDK7P50613 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.37■□□□□ 0.21
CDK7P50613 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CDK7P50613 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.36■□□□□ 0.21
CDK7P50613 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.36■□□□□ 0.21
CDK7P50613 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.36■□□□□ 0.21
CDK7P50613 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.36■□□□□ 0.21
CDK7P50613 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.36■□□□□ 0.21
CDK7P50613 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.36■□□□□ 0.21
CDK7P50613 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CDK7P50613 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 AC007881.3-201ENST00000608897 607 ntBASIC16.36■□□□□ 0.21
CDK7P50613 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.36■□□□□ 0.21
CDK7P50613 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.36■□□□□ 0.21
CDK7P50613 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 AC015909.3-201ENST00000572855 1794 ntBASIC16.36■□□□□ 0.21
CDK7P50613 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK7P50613 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CDK7P50613 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.35■□□□□ 0.21
CDK7P50613 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 LINC01165-201ENST00000445190 1623 ntBASIC16.35■□□□□ 0.21
CDK7P50613 FAM45BP-202ENST00000592932 1624 ntBASIC16.35■□□□□ 0.21
CDK7P50613 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDK7P50613 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CDK7P50613 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 MIR557-201ENST00000385239 98 ntBASIC16.35■□□□□ 0.21
CDK7P50613 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CDK7P50613 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.35■□□□□ 0.21
CDK7P50613 AC097065.1-201ENST00000425737 517 ntBASIC16.35■□□□□ 0.21
CDK7P50613 AL035414.1-201ENST00000451327 857 ntBASIC16.35■□□□□ 0.21
CDK7P50613 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.35■□□□□ 0.21
CDK7P50613 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.35■□□□□ 0.21
CDK7P50613 MIR3188-201ENST00000583494 85 ntBASIC16.35■□□□□ 0.21
CDK7P50613 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.35■□□□□ 0.21
CDK7P50613 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.35■□□□□ 0.21
CDK7P50613 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDK7P50613 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.35■□□□□ 0.21
CDK7P50613 AC025271.4-201ENST00000621477 1726 ntBASIC16.35■□□□□ 0.21
CDK7P50613 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.35■□□□□ 0.21
CDK7P50613 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CDK7P50613 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.35■□□□□ 0.21
CDK7P50613 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK7P50613 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK7P50613 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.34■□□□□ 0.21
CDK7P50613 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.34■□□□□ 0.21
CDK7P50613 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.34■□□□□ 0.21
CDK7P50613 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK7P50613 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.34■□□□□ 0.21
CDK7P50613 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK7P50613 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK7P50613 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.34■□□□□ 0.21
CDK7P50613 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDK7P50613 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDK7P50613 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.34■□□□□ 0.21
CDK7P50613 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDK7P50613 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK7P50613 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK7P50613 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK7P50613 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms