Protein–RNA interactions for Protein: P46531

NOTCH1, Neurogenic locus notch homolog protein 1, humanhuman

Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1P46531 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC10.88□□□□□ -0.67
NOTCH1P46531 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
NOTCH1P46531 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC10.88□□□□□ -0.67
NOTCH1P46531 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC10.88□□□□□ -0.67
NOTCH1P46531 AC090136.2-201ENST00000517809 420 ntBASIC10.88□□□□□ -0.67
NOTCH1P46531 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC10.88□□□□□ -0.67
NOTCH1P46531 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC10.88□□□□□ -0.67
NOTCH1P46531 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC10.88□□□□□ -0.67
NOTCH1P46531 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC10.88□□□□□ -0.67
NOTCH1P46531 AP000322.3-201ENST00000608665 388 ntBASIC10.88□□□□□ -0.67
NOTCH1P46531 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 ST5-261ENST00000626808 1071 ntTSL 5 BASIC10.88□□□□□ -0.67
NOTCH1P46531 AP000769.1-203ENST00000637245 208 ntBASIC10.88□□□□□ -0.67
NOTCH1P46531 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.88□□□□□ -0.67
NOTCH1P46531 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC10.88□□□□□ -0.67
NOTCH1P46531 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
NOTCH1P46531 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 AC021305.1-201ENST00000520656 1514 ntBASIC10.88□□□□□ -0.67
NOTCH1P46531 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
NOTCH1P46531 PYY2-201ENST00000315776 282 ntBASIC10.88□□□□□ -0.67
NOTCH1P46531 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
NOTCH1P46531 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC10.88□□□□□ -0.67
NOTCH1P46531 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC10.88□□□□□ -0.67
NOTCH1P46531 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC10.88□□□□□ -0.67
NOTCH1P46531 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC10.88□□□□□ -0.67
NOTCH1P46531 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC10.88□□□□□ -0.67
NOTCH1P46531 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC10.88□□□□□ -0.67
NOTCH1P46531 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC10.88□□□□□ -0.67
NOTCH1P46531 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.88□□□□□ -0.67
NOTCH1P46531 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.88□□□□□ -0.67
NOTCH1P46531 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NOTCH1P46531 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
NOTCH1P46531 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 RNVU1-8-201ENST00000364272 125 ntBASIC10.87□□□□□ -0.67
NOTCH1P46531 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC10.87□□□□□ -0.67
NOTCH1P46531 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC10.87□□□□□ -0.67
NOTCH1P46531 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 AC010976.2-201ENST00000609697 852 ntBASIC10.87□□□□□ -0.67
NOTCH1P46531 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC10.87□□□□□ -0.67
NOTCH1P46531 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NOTCH1P46531 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
NOTCH1P46531 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 OR8T1P-201ENST00000421347 918 ntBASIC10.87□□□□□ -0.67
NOTCH1P46531 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 AL451000.1-201ENST00000451300 1186 ntBASIC10.87□□□□□ -0.67
NOTCH1P46531 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC10.87□□□□□ -0.67
NOTCH1P46531 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC10.87□□□□□ -0.67
NOTCH1P46531 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC10.87□□□□□ -0.67
NOTCH1P46531 MT2A-202ENST00000561491 581 ntTSL 2 BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms