Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.72■□□□□ 0.11
RFC1P35251 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.72■□□□□ 0.11
RFC1P35251 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RFC1P35251 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 AL512384.1-201ENST00000406683 331 ntBASIC15.72■□□□□ 0.11
RFC1P35251 TMEM14DP-201ENST00000422205 345 ntBASIC15.72■□□□□ 0.11
RFC1P35251 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.72■□□□□ 0.11
RFC1P35251 AC245100.3-201ENST00000441281 285 ntBASIC15.72■□□□□ 0.11
RFC1P35251 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.72■□□□□ 0.11
RFC1P35251 USP32P1-208ENST00000506594 1164 ntBASIC15.72■□□□□ 0.11
RFC1P35251 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RFC1P35251 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.72■□□□□ 0.11
RFC1P35251 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.72■□□□□ 0.11
RFC1P35251 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.72■□□□□ 0.11
RFC1P35251 GNRHR2-203ENST00000581100 1187 ntBASIC15.72■□□□□ 0.11
RFC1P35251 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.72■□□□□ 0.11
RFC1P35251 IGHV3-72-202ENST00000621503 303 ntBASIC15.72■□□□□ 0.11
RFC1P35251 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.72■□□□□ 0.11
RFC1P35251 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RFC1P35251 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RFC1P35251 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
RFC1P35251 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RFC1P35251 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RFC1P35251 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 AC005089.1-201ENST00000619486 2241 ntBASIC15.72■□□□□ 0.11
RFC1P35251 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.72■□□□□ 0.11
RFC1P35251 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
RFC1P35251 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.72■□□□□ 0.11
RFC1P35251 BX640514.1-201ENST00000583223 1918 ntBASIC15.72■□□□□ 0.11
RFC1P35251 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RFC1P35251 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC1P35251 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RFC1P35251 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC1P35251 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 AL138725.1-201ENST00000407347 1314 ntBASIC15.71■□□□□ 0.11
RFC1P35251 CLUHP2-201ENST00000426660 1303 ntBASIC15.71■□□□□ 0.11
RFC1P35251 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
RFC1P35251 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC1P35251 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RFC1P35251 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 CU639417.3-201ENST00000624240 1404 ntBASIC15.71■□□□□ 0.11
RFC1P35251 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC1P35251 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC1P35251 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC1P35251 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC1P35251 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 AC005229.1-201ENST00000392885 409 ntBASIC15.71■□□□□ 0.11
RFC1P35251 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.71■□□□□ 0.11
RFC1P35251 COX5BP8-201ENST00000416911 349 ntBASIC15.71■□□□□ 0.11
RFC1P35251 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.71■□□□□ 0.11
RFC1P35251 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RFC1P35251 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.71■□□□□ 0.11
RFC1P35251 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.71■□□□□ 0.11
RFC1P35251 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.71■□□□□ 0.11
RFC1P35251 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.71■□□□□ 0.11
RFC1P35251 AC008735.3-201ENST00000596646 500 ntBASIC15.71■□□□□ 0.11
RFC1P35251 ENPP7P14-201ENST00000621765 1040 ntBASIC15.71■□□□□ 0.11
RFC1P35251 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.71■□□□□ 0.11
RFC1P35251 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.71■□□□□ 0.11
RFC1P35251 AL358472.5-202ENST00000641448 1267 ntBASIC15.71■□□□□ 0.11
RFC1P35251 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC1P35251 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RFC1P35251 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC1P35251 INE2-201ENST00000630399 1874 ntBASIC15.71■□□□□ 0.11
RFC1P35251 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC1P35251 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
RFC1P35251 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
RFC1P35251 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.71■□□□□ 0.1
RFC1P35251 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
RFC1P35251 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC1P35251 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC1P35251 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms