Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.26□□□□□ -0.29
CD40LGP29965 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CD40LGP29965 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CD40LGP29965 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.26□□□□□ -0.29
CD40LGP29965 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.26□□□□□ -0.29
CD40LGP29965 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.26□□□□□ -0.29
CD40LGP29965 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.26□□□□□ -0.29
CD40LGP29965 VN2R19P-201ENST00000442399 1052 ntBASIC13.26□□□□□ -0.29
CD40LGP29965 LILRP1-201ENST00000444199 1370 ntBASIC13.26□□□□□ -0.29
CD40LGP29965 MKRN5P-201ENST00000445263 1467 ntBASIC13.26□□□□□ -0.29
CD40LGP29965 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.26□□□□□ -0.29
CD40LGP29965 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.26□□□□□ -0.29
CD40LGP29965 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.26□□□□□ -0.29
CD40LGP29965 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CD40LGP29965 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.26□□□□□ -0.29
CD40LGP29965 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.26□□□□□ -0.29
CD40LGP29965 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.26□□□□□ -0.29
CD40LGP29965 AC061975.2-201ENST00000581722 295 ntBASIC13.26□□□□□ -0.29
CD40LGP29965 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.26□□□□□ -0.29
CD40LGP29965 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.26□□□□□ -0.29
CD40LGP29965 AL607033.1-201ENST00000623900 1599 ntBASIC13.26□□□□□ -0.29
CD40LGP29965 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.26□□□□□ -0.29
CD40LGP29965 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.26□□□□□ -0.29
CD40LGP29965 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.26□□□□□ -0.29
CD40LGP29965 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 PEG13-201ENST00000631594 5667 ntBASIC13.26□□□□□ -0.29
CD40LGP29965 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD40LGP29965 AGAP10P-201ENST00000454844 2418 ntBASIC13.25□□□□□ -0.29
CD40LGP29965 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.25□□□□□ -0.29
CD40LGP29965 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.25□□□□□ -0.29
CD40LGP29965 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.25□□□□□ -0.29
CD40LGP29965 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 NCLP1-201ENST00000445357 1963 ntBASIC13.25□□□□□ -0.29
CD40LGP29965 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CD40LGP29965 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CD40LGP29965 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.25□□□□□ -0.29
CD40LGP29965 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CD40LGP29965 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.25□□□□□ -0.29
CD40LGP29965 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CD40LGP29965 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.25□□□□□ -0.29
CD40LGP29965 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.25□□□□□ -0.29
CD40LGP29965 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CD40LGP29965 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CD40LGP29965 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.25□□□□□ -0.29
CD40LGP29965 AC009947.1-201ENST00000444350 727 ntBASIC13.25□□□□□ -0.29
CD40LGP29965 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 CXCL1P1-201ENST00000502804 216 ntBASIC13.25□□□□□ -0.29
CD40LGP29965 RNA5SP419-201ENST00000515908 135 ntBASIC13.25□□□□□ -0.29
CD40LGP29965 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.25□□□□□ -0.29
CD40LGP29965 AC145285.3-201ENST00000564603 959 ntBASIC13.25□□□□□ -0.29
CD40LGP29965 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.25□□□□□ -0.29
CD40LGP29965 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.25□□□□□ -0.29
CD40LGP29965 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.25□□□□□ -0.29
CD40LGP29965 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.25□□□□□ -0.29
CD40LGP29965 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.25□□□□□ -0.29
CD40LGP29965 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CD40LGP29965 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.25□□□□□ -0.29
CD40LGP29965 AC027601.4-201ENST00000611259 610 ntBASIC13.25□□□□□ -0.29
CD40LGP29965 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.25□□□□□ -0.29
CD40LGP29965 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.25□□□□□ -0.29
CD40LGP29965 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 AC107375.1-201ENST00000564464 2231 ntBASIC13.25□□□□□ -0.29
CD40LGP29965 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.25□□□□□ -0.29
CD40LGP29965 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.25□□□□□ -0.29
CD40LGP29965 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CD40LGP29965 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD40LGP29965 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms