Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CASP1P29466 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CASP1P29466 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.62■□□□□ 0.25
CASP1P29466 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.62■□□□□ 0.25
CASP1P29466 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.62■□□□□ 0.25
CASP1P29466 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.62■□□□□ 0.25
CASP1P29466 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CASP1P29466 GRK6P1-201ENST00000400595 1711 ntBASIC16.62■□□□□ 0.25
CASP1P29466 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 AC104581.4-201ENST00000623126 3052 ntBASIC16.62■□□□□ 0.25
CASP1P29466 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CASP1P29466 AC011498.7-201ENST00000624986 2027 ntBASIC16.62■□□□□ 0.25
CASP1P29466 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.62■□□□□ 0.25
CASP1P29466 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.62■□□□□ 0.25
CASP1P29466 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CASP1P29466 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 AP006294.1-201ENST00000415407 339 ntBASIC16.62■□□□□ 0.25
CASP1P29466 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CASP1P29466 AL590640.2-201ENST00000457038 527 ntBASIC16.62■□□□□ 0.25
CASP1P29466 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CASP1P29466 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.62■□□□□ 0.25
CASP1P29466 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.62■□□□□ 0.25
CASP1P29466 AC132938.2-201ENST00000579188 680 ntBASIC16.62■□□□□ 0.25
CASP1P29466 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.62■□□□□ 0.25
CASP1P29466 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CASP1P29466 AL591163.1-201ENST00000641757 987 ntBASIC16.62■□□□□ 0.25
CASP1P29466 OR2I1P-210ENST00000642037 4691 ntBASIC16.62■□□□□ 0.25
CASP1P29466 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CASP1P29466 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.62■□□□□ 0.25
CASP1P29466 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.62■□□□□ 0.25
CASP1P29466 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CASP1P29466 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CASP1P29466 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
CASP1P29466 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.61■□□□□ 0.25
CASP1P29466 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CASP1P29466 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.61■□□□□ 0.25
CASP1P29466 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CASP1P29466 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.61■□□□□ 0.25
CASP1P29466 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.61■□□□□ 0.25
CASP1P29466 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
CASP1P29466 AC245100.3-201ENST00000441281 285 ntBASIC16.61■□□□□ 0.25
CASP1P29466 RN7SL752P-201ENST00000463779 287 ntBASIC16.61■□□□□ 0.25
CASP1P29466 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.61■□□□□ 0.25
CASP1P29466 AP003171.2-201ENST00000528208 925 ntBASIC16.61■□□□□ 0.25
CASP1P29466 PTP4A1P2-201ENST00000546033 454 ntBASIC16.61■□□□□ 0.25
CASP1P29466 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
CASP1P29466 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.61■□□□□ 0.25
CASP1P29466 ECM1P1-201ENST00000604092 1279 ntBASIC16.61■□□□□ 0.25
CASP1P29466 AC138696.2-201ENST00000607376 223 ntBASIC16.61■□□□□ 0.25
CASP1P29466 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.61■□□□□ 0.25
CASP1P29466 AC138466.3-201ENST00000619983 221 ntBASIC16.61■□□□□ 0.25
CASP1P29466 ENPP7P14-201ENST00000621765 1040 ntBASIC16.61■□□□□ 0.25
CASP1P29466 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.61■□□□□ 0.25
CASP1P29466 AL603764.1-201ENST00000636452 321 ntBASIC16.61■□□□□ 0.25
CASP1P29466 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.61■□□□□ 0.25
CASP1P29466 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CASP1P29466 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CASP1P29466 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CASP1P29466 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.61■□□□□ 0.25
CASP1P29466 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CASP1P29466 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.61■□□□□ 0.25
CASP1P29466 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASP1P29466 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASP1P29466 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.6■□□□□ 0.25
CASP1P29466 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.6■□□□□ 0.25
CASP1P29466 AC015688.4-201ENST00000580780 1647 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms