Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA3P29320 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
EPHA3P29320 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
EPHA3P29320 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.54□□□□□ -0.08
EPHA3P29320 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
EPHA3P29320 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.54□□□□□ -0.08
EPHA3P29320 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA3P29320 AC109322.1-201ENST00000524499 1264 ntBASIC14.54□□□□□ -0.08
EPHA3P29320 AC027369.6-201ENST00000525520 931 ntBASIC14.54□□□□□ -0.08
EPHA3P29320 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA3P29320 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
EPHA3P29320 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.54□□□□□ -0.08
EPHA3P29320 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
EPHA3P29320 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.54□□□□□ -0.08
EPHA3P29320 AC027612.4-201ENST00000605371 583 ntBASIC14.54□□□□□ -0.08
EPHA3P29320 AL844908.2-201ENST00000609461 460 ntBASIC14.54□□□□□ -0.08
EPHA3P29320 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA3P29320 AC087499.5-201ENST00000452760 1342 ntBASIC14.54□□□□□ -0.08
EPHA3P29320 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
EPHA3P29320 AC020910.6-201ENST00000623084 1459 ntBASIC14.54□□□□□ -0.08
EPHA3P29320 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.54□□□□□ -0.08
EPHA3P29320 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.54□□□□□ -0.08
EPHA3P29320 AL138799.1-201ENST00000448213 1675 ntBASIC14.54□□□□□ -0.08
EPHA3P29320 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.54□□□□□ -0.08
EPHA3P29320 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA3P29320 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.54□□□□□ -0.08
EPHA3P29320 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA3P29320 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA3P29320 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
EPHA3P29320 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.54□□□□□ -0.08
EPHA3P29320 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA3P29320 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
EPHA3P29320 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.54□□□□□ -0.08
EPHA3P29320 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
EPHA3P29320 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
EPHA3P29320 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.53□□□□□ -0.08
EPHA3P29320 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
EPHA3P29320 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
EPHA3P29320 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.53□□□□□ -0.08
EPHA3P29320 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.53□□□□□ -0.08
EPHA3P29320 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 RN7SL832P-201ENST00000607781 1756 ntBASIC14.53□□□□□ -0.08
EPHA3P29320 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
EPHA3P29320 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
EPHA3P29320 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.53□□□□□ -0.08
EPHA3P29320 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 AL139400.1-201ENST00000366220 510 ntBASIC14.53□□□□□ -0.08
EPHA3P29320 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 CNN2P11-201ENST00000429351 262 ntBASIC14.53□□□□□ -0.08
EPHA3P29320 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.53□□□□□ -0.08
EPHA3P29320 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.53□□□□□ -0.08
EPHA3P29320 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.53□□□□□ -0.08
EPHA3P29320 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.53□□□□□ -0.08
EPHA3P29320 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.53□□□□□ -0.08
EPHA3P29320 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
EPHA3P29320 AC107373.2-201ENST00000607735 490 ntBASIC14.53□□□□□ -0.08
EPHA3P29320 AL391069.4-201ENST00000609583 481 ntBASIC14.53□□□□□ -0.08
EPHA3P29320 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.53□□□□□ -0.08
EPHA3P29320 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.53□□□□□ -0.08
EPHA3P29320 Z92544.3-201ENST00000624747 417 ntBASIC14.53□□□□□ -0.08
EPHA3P29320 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.53□□□□□ -0.08
EPHA3P29320 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.53□□□□□ -0.08
EPHA3P29320 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.53□□□□□ -0.08
EPHA3P29320 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
EPHA3P29320 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
EPHA3P29320 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 AL356585.2-201ENST00000625078 2396 ntBASIC14.53□□□□□ -0.08
EPHA3P29320 PPT1-213ENST00000641319 2388 ntBASIC14.53□□□□□ -0.08
EPHA3P29320 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
EPHA3P29320 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
EPHA3P29320 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
EPHA3P29320 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
EPHA3P29320 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
EPHA3P29320 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
EPHA3P29320 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
EPHA3P29320 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
EPHA3P29320 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
EPHA3P29320 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
EPHA3P29320 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.52□□□□□ -0.08
EPHA3P29320 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EPHA3P29320 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
EPHA3P29320 AL645937.2-201ENST00000396808 931 ntBASIC14.52□□□□□ -0.09
EPHA3P29320 AC254562.1-201ENST00000417586 456 ntBASIC14.52□□□□□ -0.09
EPHA3P29320 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.52□□□□□ -0.09
EPHA3P29320 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms