Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 PUDPP3-201ENST00000445368 636 ntBASIC12.81□□□□□ -0.36
CD40P25942 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.81□□□□□ -0.36
CD40P25942 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.81□□□□□ -0.36
CD40P25942 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.81□□□□□ -0.36
CD40P25942 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.81□□□□□ -0.36
CD40P25942 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.81□□□□□ -0.36
CD40P25942 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.81□□□□□ -0.36
CD40P25942 AC027601.3-201ENST00000622907 509 ntBASIC12.81□□□□□ -0.36
CD40P25942 AC004923.1-202ENST00000642106 209 ntBASIC12.81□□□□□ -0.36
CD40P25942 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.81□□□□□ -0.36
CD40P25942 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CD40P25942 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CD40P25942 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.8□□□□□ -0.36
CD40P25942 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CD40P25942 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 AC004899.1-201ENST00000424687 1714 ntBASIC12.8□□□□□ -0.36
CD40P25942 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CD40P25942 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.8□□□□□ -0.36
CD40P25942 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CD40P25942 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CD40P25942 DPM3-202ENST00000368399 517 ntBASIC12.8□□□□□ -0.36
CD40P25942 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CD40P25942 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CD40P25942 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 AC012441.2-201ENST00000444843 739 ntBASIC12.8□□□□□ -0.36
CD40P25942 AL035414.1-201ENST00000451327 857 ntBASIC12.8□□□□□ -0.36
CD40P25942 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.8□□□□□ -0.36
CD40P25942 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.8□□□□□ -0.36
CD40P25942 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.8□□□□□ -0.36
CD40P25942 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.8□□□□□ -0.36
CD40P25942 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CD40P25942 AC005324.6-201ENST00000587972 613 ntBASIC12.8□□□□□ -0.36
CD40P25942 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CD40P25942 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.8□□□□□ -0.36
CD40P25942 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CD40P25942 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.8□□□□□ -0.36
CD40P25942 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CD40P25942 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.8□□□□□ -0.36
CD40P25942 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.8□□□□□ -0.36
CD40P25942 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CD40P25942 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.8□□□□□ -0.36
CD40P25942 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CD40P25942 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.8□□□□□ -0.36
CD40P25942 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms