Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.68□□□□□ -0.38
VAMP1P23763 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.68□□□□□ -0.38
VAMP1P23763 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VAMP1P23763 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VAMP1P23763 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VAMP1P23763 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VAMP1P23763 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VAMP1P23763 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
VAMP1P23763 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VAMP1P23763 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
VAMP1P23763 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VAMP1P23763 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VAMP1P23763 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 AL354702.1-201ENST00000442006 1960 ntBASIC12.67□□□□□ -0.38
VAMP1P23763 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VAMP1P23763 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
VAMP1P23763 AC063923.1-201ENST00000478982 1619 ntBASIC12.67□□□□□ -0.38
VAMP1P23763 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.67□□□□□ -0.38
VAMP1P23763 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.67□□□□□ -0.38
VAMP1P23763 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.67□□□□□ -0.38
VAMP1P23763 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.67□□□□□ -0.38
VAMP1P23763 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.67□□□□□ -0.38
VAMP1P23763 AC015910.1-201ENST00000579400 975 ntBASIC12.67□□□□□ -0.38
VAMP1P23763 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.67□□□□□ -0.38
VAMP1P23763 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 CDH11-212ENST00000566827 2395 ntTSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 KRT8P24-201ENST00000560290 1559 ntBASIC12.67□□□□□ -0.38
VAMP1P23763 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.67□□□□□ -0.38
VAMP1P23763 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VAMP1P23763 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
VAMP1P23763 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.67□□□□□ -0.38
VAMP1P23763 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 AC019294.4-201ENST00000561777 2905 ntBASIC12.67□□□□□ -0.38
VAMP1P23763 OR2I1P-208ENST00000641137 4948 ntBASIC12.67□□□□□ -0.38
VAMP1P23763 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.67□□□□□ -0.38
VAMP1P23763 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VAMP1P23763 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.66□□□□□ -0.38
VAMP1P23763 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 AKAP8P1-201ENST00000434743 1349 ntBASIC12.66□□□□□ -0.38
VAMP1P23763 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.66□□□□□ -0.38
VAMP1P23763 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
VAMP1P23763 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
VAMP1P23763 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.66□□□□□ -0.38
VAMP1P23763 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
VAMP1P23763 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
VAMP1P23763 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.66□□□□□ -0.38
VAMP1P23763 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.66□□□□□ -0.38
VAMP1P23763 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VAMP1P23763 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VAMP1P23763 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.66□□□□□ -0.38
VAMP1P23763 AL135744.1-201ENST00000565098 629 ntBASIC12.66□□□□□ -0.38
VAMP1P23763 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.66□□□□□ -0.38
VAMP1P23763 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.66□□□□□ -0.38
VAMP1P23763 AC099522.2-201ENST00000607001 744 ntBASIC12.66□□□□□ -0.38
VAMP1P23763 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms