Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
TNFSF4P23510 TLE1P1-201ENST00000422965 589 ntBASIC12.8□□□□□ -0.36
TNFSF4P23510 AC007969.1-201ENST00000433675 447 ntBASIC12.8□□□□□ -0.36
TNFSF4P23510 FAM8A4P-201ENST00000435433 1213 ntBASIC12.8□□□□□ -0.36
TNFSF4P23510 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 AC026434.2-201ENST00000506094 1078 ntBASIC12.8□□□□□ -0.36
TNFSF4P23510 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TNFSF4P23510 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.8□□□□□ -0.36
TNFSF4P23510 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.8□□□□□ -0.36
TNFSF4P23510 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.8□□□□□ -0.36
TNFSF4P23510 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.8□□□□□ -0.36
TNFSF4P23510 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.8□□□□□ -0.36
TNFSF4P23510 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TNFSF4P23510 ECM1P1-201ENST00000604092 1279 ntBASIC12.8□□□□□ -0.36
TNFSF4P23510 AC244669.2-201ENST00000612320 853 ntBASIC12.8□□□□□ -0.36
TNFSF4P23510 AC006453.4-201ENST00000636949 1252 ntBASIC12.8□□□□□ -0.36
TNFSF4P23510 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
TNFSF4P23510 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 AHCYP2-201ENST00000430630 1300 ntBASIC12.8□□□□□ -0.36
TNFSF4P23510 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.8□□□□□ -0.36
TNFSF4P23510 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TNFSF4P23510 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.8□□□□□ -0.36
TNFSF4P23510 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.8□□□□□ -0.36
TNFSF4P23510 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.8□□□□□ -0.36
TNFSF4P23510 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TNFSF4P23510 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TNFSF4P23510 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TNFSF4P23510 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TNFSF4P23510 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TNFSF4P23510 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TNFSF4P23510 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 MIR1909-201ENST00000411312 80 ntBASIC12.79□□□□□ -0.36
TNFSF4P23510 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TNFSF4P23510 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.79□□□□□ -0.36
TNFSF4P23510 FAM21FP-201ENST00000426241 1131 ntBASIC12.79□□□□□ -0.36
TNFSF4P23510 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.79□□□□□ -0.36
TNFSF4P23510 YBX1P6-201ENST00000442962 1002 ntBASIC12.79□□□□□ -0.36
TNFSF4P23510 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.79□□□□□ -0.36
TNFSF4P23510 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.79□□□□□ -0.36
TNFSF4P23510 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.79□□□□□ -0.36
TNFSF4P23510 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.79□□□□□ -0.36
TNFSF4P23510 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.79□□□□□ -0.36
TNFSF4P23510 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.79□□□□□ -0.36
TNFSF4P23510 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TNFSF4P23510 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.79□□□□□ -0.36
TNFSF4P23510 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 AC006058.4-201ENST00000624016 1670 ntBASIC12.79□□□□□ -0.36
TNFSF4P23510 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TNFSF4P23510 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.79□□□□□ -0.36
TNFSF4P23510 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.79□□□□□ -0.36
TNFSF4P23510 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.79□□□□□ -0.36
TNFSF4P23510 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.79□□□□□ -0.36
TNFSF4P23510 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TNFSF4P23510 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.79□□□□□ -0.36
TNFSF4P23510 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.79□□□□□ -0.36
TNFSF4P23510 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TNFSF4P23510 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.78□□□□□ -0.36
TNFSF4P23510 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms