Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
RAB4AP20338 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
RAB4AP20338 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.5□□□□□ -0.57
RAB4AP20338 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
RAB4AP20338 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
RAB4AP20338 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RAB4AP20338 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.49□□□□□ -0.57
RAB4AP20338 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 PER1-211ENST00000581082 4521 ntTSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 AC211429.1-201ENST00000415277 523 ntBASIC11.49□□□□□ -0.57
RAB4AP20338 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.49□□□□□ -0.57
RAB4AP20338 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 FAM185BP-201ENST00000443595 716 ntBASIC11.49□□□□□ -0.57
RAB4AP20338 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 KRT18P31-201ENST00000506277 1292 ntBASIC11.49□□□□□ -0.57
RAB4AP20338 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.49□□□□□ -0.57
RAB4AP20338 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.49□□□□□ -0.57
RAB4AP20338 AL031432.2-201ENST00000566714 459 ntBASIC11.49□□□□□ -0.57
RAB4AP20338 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 AC002347.1-201ENST00000569543 541 ntBASIC11.49□□□□□ -0.57
RAB4AP20338 AL928711.1-201ENST00000570165 459 ntBASIC11.49□□□□□ -0.57
RAB4AP20338 AC025062.2-201ENST00000605477 670 ntBASIC11.49□□□□□ -0.57
RAB4AP20338 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.49□□□□□ -0.57
RAB4AP20338 ACTL9-202ENST00000612068 1252 ntBASIC11.49□□□□□ -0.57
RAB4AP20338 NPAP1P7-201ENST00000613027 823 ntBASIC11.49□□□□□ -0.57
RAB4AP20338 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.49□□□□□ -0.57
RAB4AP20338 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.49□□□□□ -0.57
RAB4AP20338 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
RAB4AP20338 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC11.49□□□□□ -0.57
RAB4AP20338 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RAB4AP20338 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.48□□□□□ -0.57
RAB4AP20338 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RAB4AP20338 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RAB4AP20338 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms