Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.87■□□□□ 0.45
NCLP19338 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC17.87■□□□□ 0.45
NCLP19338 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NCLP19338 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC17.86■□□□□ 0.45
NCLP19338 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NCLP19338 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC17.86■□□□□ 0.45
NCLP19338 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 SPDYE17-201ENST00000412399 783 ntBASIC17.86■□□□□ 0.45
NCLP19338 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.86■□□□□ 0.45
NCLP19338 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.86■□□□□ 0.45
NCLP19338 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.86■□□□□ 0.45
NCLP19338 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.86■□□□□ 0.45
NCLP19338 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.86■□□□□ 0.45
NCLP19338 AC073592.8-201ENST00000624126 511 ntBASIC17.86■□□□□ 0.45
NCLP19338 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.86■□□□□ 0.45
NCLP19338 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC17.86■□□□□ 0.45
NCLP19338 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
NCLP19338 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.86■□□□□ 0.45
NCLP19338 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
NCLP19338 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
NCLP19338 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
NCLP19338 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.86■□□□□ 0.45
NCLP19338 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
NCLP19338 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC17.86■□□□□ 0.45
NCLP19338 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 MIR193BHG-211ENST00000641433 5365 ntBASIC17.85■□□□□ 0.45
NCLP19338 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.85■□□□□ 0.45
NCLP19338 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.85■□□□□ 0.45
NCLP19338 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.85■□□□□ 0.45
NCLP19338 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NCLP19338 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
NCLP19338 AL035633.1-201ENST00000406139 838 ntBASIC17.85■□□□□ 0.45
NCLP19338 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.85■□□□□ 0.45
NCLP19338 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.85■□□□□ 0.45
NCLP19338 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.85■□□□□ 0.45
NCLP19338 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.85■□□□□ 0.45
NCLP19338 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 UGT1A2P-201ENST00000454886 866 ntBASIC17.85■□□□□ 0.45
NCLP19338 KRT8P12-202ENST00000472924 1397 ntBASIC17.85■□□□□ 0.45
NCLP19338 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.85■□□□□ 0.45
NCLP19338 SLED1-202ENST00000512051 380 ntBASIC17.85■□□□□ 0.45
NCLP19338 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.85■□□□□ 0.45
NCLP19338 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC17.85■□□□□ 0.45
NCLP19338 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.85■□□□□ 0.45
NCLP19338 AC138761.1-201ENST00000584393 385 ntBASIC17.85■□□□□ 0.45
NCLP19338 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.85■□□□□ 0.45
NCLP19338 AL133215.2-201ENST00000609242 977 ntBASIC17.85■□□□□ 0.45
NCLP19338 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NCLP19338 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NCLP19338 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NCLP19338 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC17.85■□□□□ 0.45
NCLP19338 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NCLP19338 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.84■□□□□ 0.45
NCLP19338 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NCLP19338 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NCLP19338 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NCLP19338 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NCLP19338 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms