Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 AC020910.5-201ENST00000623668 1865 ntBASIC13.38□□□□□ -0.27
HLA-DOBP13765 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
HLA-DOBP13765 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLA-DOBP13765 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 COX5BP8-201ENST00000416911 349 ntBASIC13.37□□□□□ -0.27
HLA-DOBP13765 POM121L8P-201ENST00000417732 1281 ntBASIC13.37□□□□□ -0.27
HLA-DOBP13765 AC245100.3-201ENST00000441281 285 ntBASIC13.37□□□□□ -0.27
HLA-DOBP13765 POM121L9P-203ENST00000441984 1285 ntBASIC13.37□□□□□ -0.27
HLA-DOBP13765 AL355864.2-201ENST00000447420 863 ntBASIC13.37□□□□□ -0.27
HLA-DOBP13765 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 ENPP7P14-201ENST00000621765 1040 ntBASIC13.37□□□□□ -0.27
HLA-DOBP13765 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 CU639417.3-201ENST00000624240 1404 ntBASIC13.37□□□□□ -0.27
HLA-DOBP13765 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HLA-DOBP13765 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HLA-DOBP13765 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 AC011840.2-201ENST00000563063 1520 ntBASIC13.36□□□□□ -0.27
HLA-DOBP13765 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 RN7SKP230-201ENST00000365642 335 ntBASIC13.36□□□□□ -0.27
HLA-DOBP13765 AC005229.1-201ENST00000392885 409 ntBASIC13.36□□□□□ -0.27
HLA-DOBP13765 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 NME2P1-201ENST00000426182 414 ntBASIC13.36□□□□□ -0.27
HLA-DOBP13765 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms