Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC19.16■□□□□ 0.66
MS4A1P11836 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A1P11836 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MS4A1P11836 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MS4A1P11836 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 AL354702.1-201ENST00000442006 1960 ntBASIC19.15■□□□□ 0.66
MS4A1P11836 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
MS4A1P11836 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
MS4A1P11836 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC19.15■□□□□ 0.66
MS4A1P11836 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.15■□□□□ 0.66
MS4A1P11836 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.15■□□□□ 0.66
MS4A1P11836 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.15■□□□□ 0.66
MS4A1P11836 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.15■□□□□ 0.66
MS4A1P11836 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.15■□□□□ 0.66
MS4A1P11836 AC190387.1-201ENST00000551683 408 ntBASIC19.15■□□□□ 0.66
MS4A1P11836 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.15■□□□□ 0.66
MS4A1P11836 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC19.15■□□□□ 0.66
MS4A1P11836 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.15■□□□□ 0.66
MS4A1P11836 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MS4A1P11836 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MS4A1P11836 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.14■□□□□ 0.66
MS4A1P11836 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MS4A1P11836 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
MS4A1P11836 APP-205ENST00000358918 2366 ntTSL 5 BASIC19.14■□□□□ 0.66
MS4A1P11836 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
MS4A1P11836 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC19.14■□□□□ 0.66
MS4A1P11836 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.14■□□□□ 0.66
MS4A1P11836 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
MS4A1P11836 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MS4A1P11836 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC19.14■□□□□ 0.65
MS4A1P11836 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
MS4A1P11836 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.14■□□□□ 0.65
MS4A1P11836 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MS4A1P11836 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MS4A1P11836 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MS4A1P11836 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
MS4A1P11836 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MS4A1P11836 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.14■□□□□ 0.65
MS4A1P11836 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MS4A1P11836 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.14■□□□□ 0.65
MS4A1P11836 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MS4A1P11836 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
MS4A1P11836 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
MS4A1P11836 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
MS4A1P11836 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.13■□□□□ 0.65
MS4A1P11836 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.13■□□□□ 0.65
MS4A1P11836 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
MS4A1P11836 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.13■□□□□ 0.65
MS4A1P11836 AC092364.2-202ENST00000597012 1073 ntBASIC19.13■□□□□ 0.65
MS4A1P11836 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
MS4A1P11836 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.13■□□□□ 0.65
MS4A1P11836 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
MS4A1P11836 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MS4A1P11836 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.13■□□□□ 0.65
MS4A1P11836 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms