Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.51□□□□□ -0.25
FREM3P0C091 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FREM3P0C091 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
FREM3P0C091 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.51□□□□□ -0.25
FREM3P0C091 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FREM3P0C091 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FREM3P0C091 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
FREM3P0C091 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FREM3P0C091 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FREM3P0C091 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
FREM3P0C091 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.51□□□□□ -0.25
FREM3P0C091 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FREM3P0C091 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FREM3P0C091 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FREM3P0C091 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.51□□□□□ -0.25
FREM3P0C091 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.51□□□□□ -0.25
FREM3P0C091 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.51□□□□□ -0.25
FREM3P0C091 AC027237.1-201ENST00000560942 655 ntBASIC13.51□□□□□ -0.25
FREM3P0C091 AC103988.2-201ENST00000561804 725 ntBASIC13.51□□□□□ -0.25
FREM3P0C091 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.51□□□□□ -0.25
FREM3P0C091 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
FREM3P0C091 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.51□□□□□ -0.25
FREM3P0C091 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
FREM3P0C091 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.51□□□□□ -0.25
FREM3P0C091 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FREM3P0C091 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.5□□□□□ -0.25
FREM3P0C091 AP001267.2-201ENST00000532619 2086 ntBASIC13.5□□□□□ -0.25
FREM3P0C091 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
FREM3P0C091 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 AC018735.1-201ENST00000437208 1502 ntBASIC13.5□□□□□ -0.25
FREM3P0C091 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.5□□□□□ -0.25
FREM3P0C091 AC140479.7-201ENST00000636301 2332 ntBASIC13.5□□□□□ -0.25
FREM3P0C091 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
FREM3P0C091 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.5□□□□□ -0.25
FREM3P0C091 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.5□□□□□ -0.25
FREM3P0C091 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.5□□□□□ -0.25
FREM3P0C091 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.5□□□□□ -0.25
FREM3P0C091 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
FREM3P0C091 AC091804.1-201ENST00000486888 567 ntBASIC13.5□□□□□ -0.25
FREM3P0C091 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.5□□□□□ -0.25
FREM3P0C091 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.5□□□□□ -0.25
FREM3P0C091 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.5□□□□□ -0.25
FREM3P0C091 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.5□□□□□ -0.25
FREM3P0C091 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.5□□□□□ -0.25
FREM3P0C091 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 BX640514.1-201ENST00000583223 1918 ntBASIC13.5□□□□□ -0.25
FREM3P0C091 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.5□□□□□ -0.25
FREM3P0C091 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
FREM3P0C091 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.5□□□□□ -0.25
FREM3P0C091 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.5□□□□□ -0.25
FREM3P0C091 NORAD-201ENST00000565493 5339 ntBASIC13.5□□□□□ -0.25
FREM3P0C091 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.5□□□□□ -0.25
FREM3P0C091 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.5□□□□□ -0.25
FREM3P0C091 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FREM3P0C091 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
FREM3P0C091 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
FREM3P0C091 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.49□□□□□ -0.25
FREM3P0C091 KRT18P36-201ENST00000411618 1276 ntBASIC13.49□□□□□ -0.25
FREM3P0C091 GPAA1P2-201ENST00000417923 928 ntBASIC13.49□□□□□ -0.25
FREM3P0C091 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.49□□□□□ -0.25
FREM3P0C091 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.49□□□□□ -0.25
FREM3P0C091 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.49□□□□□ -0.25
FREM3P0C091 AC022494.1-201ENST00000466044 728 ntBASIC13.49□□□□□ -0.25
FREM3P0C091 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.49□□□□□ -0.25
FREM3P0C091 ACTG1P17-201ENST00000558391 1119 ntBASIC13.49□□□□□ -0.25
FREM3P0C091 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.49□□□□□ -0.25
FREM3P0C091 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.49□□□□□ -0.25
FREM3P0C091 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
FREM3P0C091 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.49□□□□□ -0.25
FREM3P0C091 KHSRPP1-201ENST00000427983 1768 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms