Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.54□□□□□ -0.4
CD74P04233 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.54□□□□□ -0.4
CD74P04233 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
CD74P04233 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.54□□□□□ -0.4
CD74P04233 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CD74P04233 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CD74P04233 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CD74P04233 MED15P5-201ENST00000423150 992 ntBASIC12.54□□□□□ -0.4
CD74P04233 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.54□□□□□ -0.4
CD74P04233 KRT18P32-201ENST00000424695 1287 ntBASIC12.54□□□□□ -0.4
CD74P04233 FAM58DP-201ENST00000428076 619 ntBASIC12.54□□□□□ -0.4
CD74P04233 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.54□□□□□ -0.4
CD74P04233 AC005237.2-201ENST00000434368 219 ntBASIC12.54□□□□□ -0.4
CD74P04233 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.54□□□□□ -0.4
CD74P04233 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.54□□□□□ -0.4
CD74P04233 AC140113.2-201ENST00000604370 208 ntBASIC12.54□□□□□ -0.4
CD74P04233 AL589739.1-201ENST00000607720 493 ntBASIC12.54□□□□□ -0.4
CD74P04233 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CD74P04233 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 CETN4P-206ENST00000642099 2168 ntBASIC12.54□□□□□ -0.4
CD74P04233 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.54□□□□□ -0.4
CD74P04233 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CD74P04233 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 TUBB3P1-201ENST00000405796 1332 ntBASIC12.54□□□□□ -0.4
CD74P04233 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.54□□□□□ -0.4
CD74P04233 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.54□□□□□ -0.4
CD74P04233 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 AC019294.4-201ENST00000561777 2905 ntBASIC12.54□□□□□ -0.4
CD74P04233 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CD74P04233 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CD74P04233 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.54□□□□□ -0.4
CD74P04233 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.54□□□□□ -0.4
CD74P04233 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CD74P04233 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CD74P04233 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.53□□□□□ -0.4
CD74P04233 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CD74P04233 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CD74P04233 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CD74P04233 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CD74P04233 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.53□□□□□ -0.4
CD74P04233 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.53□□□□□ -0.4
CD74P04233 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.53□□□□□ -0.4
CD74P04233 MCCD1P2-201ENST00000423228 335 ntBASIC12.53□□□□□ -0.4
CD74P04233 AL353779.1-201ENST00000434793 351 ntBASIC12.53□□□□□ -0.4
CD74P04233 SPDYE14P-201ENST00000442619 822 ntBASIC12.53□□□□□ -0.4
CD74P04233 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.53□□□□□ -0.4
CD74P04233 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CD74P04233 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
CD74P04233 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.53□□□□□ -0.4
CD74P04233 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CD74P04233 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.53□□□□□ -0.4
CD74P04233 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.53□□□□□ -0.4
CD74P04233 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CD74P04233 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
CD74P04233 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.53□□□□□ -0.4
CD74P04233 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CD74P04233 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms