Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
ALX3O95076 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ALX3O95076 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.29□□□□□ -0.28
ALX3O95076 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.29□□□□□ -0.28
ALX3O95076 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.29□□□□□ -0.28
ALX3O95076 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.29□□□□□ -0.28
ALX3O95076 KRT18P43-201ENST00000469825 1281 ntBASIC13.29□□□□□ -0.28
ALX3O95076 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.29□□□□□ -0.28
ALX3O95076 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.29□□□□□ -0.28
ALX3O95076 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ALX3O95076 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.29□□□□□ -0.28
ALX3O95076 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.29□□□□□ -0.28
ALX3O95076 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.29□□□□□ -0.28
ALX3O95076 AC025181.2-201ENST00000606994 802 ntBASIC13.29□□□□□ -0.28
ALX3O95076 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ALX3O95076 MIR6080-201ENST00000617359 66 ntBASIC13.29□□□□□ -0.28
ALX3O95076 LINC00628-201ENST00000628516 1289 ntBASIC13.29□□□□□ -0.28
ALX3O95076 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.29□□□□□ -0.28
ALX3O95076 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.29□□□□□ -0.28
ALX3O95076 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 AF228730.6-201ENST00000641497 218 ntBASIC13.29□□□□□ -0.28
ALX3O95076 AC084121.3-201ENST00000641716 218 ntBASIC13.29□□□□□ -0.28
ALX3O95076 AC105233.6-201ENST00000642093 218 ntBASIC13.29□□□□□ -0.28
ALX3O95076 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ALX3O95076 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ALX3O95076 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.29□□□□□ -0.28
ALX3O95076 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ALX3O95076 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.28□□□□□ -0.28
ALX3O95076 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ALX3O95076 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 AC007326.2-201ENST00000624224 7579 ntBASIC13.28□□□□□ -0.28
ALX3O95076 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ALX3O95076 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.28□□□□□ -0.28
ALX3O95076 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ALX3O95076 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.28□□□□□ -0.28
ALX3O95076 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.28□□□□□ -0.28
ALX3O95076 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.28□□□□□ -0.28
ALX3O95076 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
ALX3O95076 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ALX3O95076 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ALX3O95076 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.28□□□□□ -0.28
ALX3O95076 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.28□□□□□ -0.28
ALX3O95076 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.28□□□□□ -0.28
ALX3O95076 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.28□□□□□ -0.28
ALX3O95076 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.28□□□□□ -0.28
ALX3O95076 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.28□□□□□ -0.28
ALX3O95076 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.28□□□□□ -0.28
ALX3O95076 AC069262.1-201ENST00000539058 672 ntBASIC13.28□□□□□ -0.28
ALX3O95076 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.28□□□□□ -0.28
ALX3O95076 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.28□□□□□ -0.28
ALX3O95076 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ALX3O95076 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ALX3O95076 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.28□□□□□ -0.28
ALX3O95076 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 AC074044.1-201ENST00000609673 707 ntBASIC13.28□□□□□ -0.28
ALX3O95076 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.28□□□□□ -0.28
ALX3O95076 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.28□□□□□ -0.28
ALX3O95076 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.28□□□□□ -0.28
ALX3O95076 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ALX3O95076 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms