Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.29■□□□□ 0.36
CTNND1O60716 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.29■□□□□ 0.36
CTNND1O60716 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNND1O60716 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CTNND1O60716 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTNND1O60716 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNND1O60716 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.29■□□□□ 0.36
CTNND1O60716 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 AC013726.1-201ENST00000563747 2285 ntBASIC17.28■□□□□ 0.36
CTNND1O60716 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.28■□□□□ 0.36
CTNND1O60716 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CTNND1O60716 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.28■□□□□ 0.36
CTNND1O60716 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CTNND1O60716 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CTNND1O60716 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.28■□□□□ 0.36
CTNND1O60716 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.28■□□□□ 0.36
CTNND1O60716 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.28■□□□□ 0.36
CTNND1O60716 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
CTNND1O60716 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.28■□□□□ 0.36
CTNND1O60716 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTNND1O60716 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.28■□□□□ 0.36
CTNND1O60716 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CTNND1O60716 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.28■□□□□ 0.36
CTNND1O60716 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.28■□□□□ 0.36
CTNND1O60716 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.28■□□□□ 0.36
CTNND1O60716 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.28■□□□□ 0.36
CTNND1O60716 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CTNND1O60716 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNND1O60716 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTNND1O60716 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CTNND1O60716 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNND1O60716 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.27■□□□□ 0.36
CTNND1O60716 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CTNND1O60716 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNND1O60716 TMBIM7P-202ENST00000641474 1516 ntBASIC17.27■□□□□ 0.36
CTNND1O60716 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.27■□□□□ 0.36
CTNND1O60716 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CTNND1O60716 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNND1O60716 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNND1O60716 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNND1O60716 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNND1O60716 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.27■□□□□ 0.36
CTNND1O60716 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNND1O60716 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTNND1O60716 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.27■□□□□ 0.36
CTNND1O60716 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CTNND1O60716 NPM1P43-201ENST00000558669 786 ntBASIC17.27■□□□□ 0.36
CTNND1O60716 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.27■□□□□ 0.36
CTNND1O60716 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNND1O60716 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.27■□□□□ 0.36
CTNND1O60716 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CTNND1O60716 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.27■□□□□ 0.36
CTNND1O60716 LINC01783-202ENST00000614408 828 ntBASIC17.27■□□□□ 0.36
CTNND1O60716 BX284668.2-205ENST00000619677 828 ntBASIC17.27■□□□□ 0.36
CTNND1O60716 AC007718.1-201ENST00000621078 280 ntBASIC17.27■□□□□ 0.36
CTNND1O60716 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
CTNND1O60716 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CTNND1O60716 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNND1O60716 AC136621.1-201ENST00000624017 2304 ntBASIC17.27■□□□□ 0.35
CTNND1O60716 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
CTNND1O60716 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.27■□□□□ 0.35
CTNND1O60716 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CTNND1O60716 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTNND1O60716 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTNND1O60716 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CTNND1O60716 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CTNND1O60716 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTNND1O60716 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTNND1O60716 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 LINC01165-201ENST00000445190 1623 ntBASIC17.26■□□□□ 0.35
CTNND1O60716 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.26■□□□□ 0.35
CTNND1O60716 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTNND1O60716 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms