Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 RN7SKP175-201ENST00000408472 289 ntBASIC13.28□□□□□ -0.28
TRAF3IP2O43734 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 CNN2P8-201ENST00000421872 913 ntBASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AC007551.1-201ENST00000457394 519 ntBASIC13.28□□□□□ -0.28
TRAF3IP2O43734 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AP003171.2-201ENST00000528208 925 ntBASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AC078819.1-201ENST00000547454 765 ntBASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AC012085.1-201ENST00000548270 765 ntBASIC13.28□□□□□ -0.28
TRAF3IP2O43734 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AL035252.4-201ENST00000624174 288 ntBASIC13.28□□□□□ -0.28
TRAF3IP2O43734 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AC063926.2-201ENST00000623766 1308 ntBASIC13.28□□□□□ -0.28
TRAF3IP2O43734 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AL136172.1-201ENST00000598590 1394 ntBASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAF3IP2O43734 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 MYO15B-237ENST00000642007 4893 ntBASIC13.27□□□□□ -0.29
TRAF3IP2O43734 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 CD8B2-202ENST00000417670 633 ntBASIC13.27□□□□□ -0.29
TRAF3IP2O43734 ARSEP1-201ENST00000420443 635 ntBASIC13.27□□□□□ -0.29
TRAF3IP2O43734 AC005034.1-201ENST00000426657 489 ntBASIC13.27□□□□□ -0.29
TRAF3IP2O43734 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 AC138951.2-201ENST00000623455 1161 ntBASIC13.27□□□□□ -0.29
TRAF3IP2O43734 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAF3IP2O43734 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms