Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.55□□□□□ -0.08
E2F3O00716 AC041040.2-201ENST00000622926 2899 ntBASIC14.55□□□□□ -0.08
E2F3O00716 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.55□□□□□ -0.08
E2F3O00716 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
E2F3O00716 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
E2F3O00716 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
E2F3O00716 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.55□□□□□ -0.08
E2F3O00716 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.55□□□□□ -0.08
E2F3O00716 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.55□□□□□ -0.08
E2F3O00716 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 AC234783.1-201ENST00000441761 496 ntBASIC14.55□□□□□ -0.08
E2F3O00716 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.55□□□□□ -0.08
E2F3O00716 AC007389.4-201ENST00000454674 793 ntBASIC14.55□□□□□ -0.08
E2F3O00716 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
E2F3O00716 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.55□□□□□ -0.08
E2F3O00716 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.55□□□□□ -0.08
E2F3O00716 AP001063.1-201ENST00000568332 529 ntBASIC14.55□□□□□ -0.08
E2F3O00716 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.55□□□□□ -0.08
E2F3O00716 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.55□□□□□ -0.08
E2F3O00716 AC008735.3-201ENST00000596646 500 ntBASIC14.55□□□□□ -0.08
E2F3O00716 AC004466.1-201ENST00000599515 1080 ntBASIC14.55□□□□□ -0.08
E2F3O00716 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.55□□□□□ -0.08
E2F3O00716 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
E2F3O00716 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.55□□□□□ -0.08
E2F3O00716 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
E2F3O00716 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
E2F3O00716 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.55□□□□□ -0.08
E2F3O00716 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.55□□□□□ -0.08
E2F3O00716 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
E2F3O00716 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.55□□□□□ -0.08
E2F3O00716 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.54□□□□□ -0.08
E2F3O00716 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
E2F3O00716 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.54□□□□□ -0.08
E2F3O00716 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.54□□□□□ -0.08
E2F3O00716 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 MYO15B-237ENST00000642007 4893 ntBASIC14.54□□□□□ -0.08
E2F3O00716 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
E2F3O00716 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
E2F3O00716 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
E2F3O00716 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
E2F3O00716 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.54□□□□□ -0.08
E2F3O00716 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.54□□□□□ -0.08
E2F3O00716 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.54□□□□□ -0.08
E2F3O00716 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
E2F3O00716 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.54□□□□□ -0.08
E2F3O00716 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.54□□□□□ -0.08
E2F3O00716 COX11-210ENST00000639671 696 ntBASIC14.54□□□□□ -0.08
E2F3O00716 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.54□□□□□ -0.08
E2F3O00716 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.54□□□□□ -0.08
E2F3O00716 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
E2F3O00716 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.54□□□□□ -0.08
E2F3O00716 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.54□□□□□ -0.08
E2F3O00716 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
E2F3O00716 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.54□□□□□ -0.08
E2F3O00716 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.54□□□□□ -0.08
E2F3O00716 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
E2F3O00716 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
E2F3O00716 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
E2F3O00716 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms