Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TRIM38O00635 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM38O00635 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM38O00635 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.05■□□□□ -0
TRIM38O00635 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.05■□□□□ -0
TRIM38O00635 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.05■□□□□ -0
TRIM38O00635 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
TRIM38O00635 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM38O00635 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM38O00635 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.05■□□□□ -0
TRIM38O00635 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.05■□□□□ -0
TRIM38O00635 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRIM38O00635 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM38O00635 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.05■□□□□ -0
TRIM38O00635 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.05■□□□□ -0
TRIM38O00635 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM38O00635 RNA5SP486-201ENST00000515961 83 ntBASIC15.05■□□□□ -0
TRIM38O00635 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.05■□□□□ -0
TRIM38O00635 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRIM38O00635 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.05■□□□□ -0
TRIM38O00635 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.05■□□□□ -0
TRIM38O00635 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM38O00635 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.05■□□□□ -0
TRIM38O00635 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRIM38O00635 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.05■□□□□ -0
TRIM38O00635 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM38O00635 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRIM38O00635 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
TRIM38O00635 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM38O00635 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM38O00635 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRIM38O00635 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRIM38O00635 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.05■□□□□ -0
TRIM38O00635 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM38O00635 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM38O00635 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
TRIM38O00635 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM38O00635 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TRIM38O00635 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.04■□□□□ -0
TRIM38O00635 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.04■□□□□ -0
TRIM38O00635 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRIM38O00635 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.04■□□□□ -0
TRIM38O00635 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.04■□□□□ -0
TRIM38O00635 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM38O00635 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.04■□□□□ -0
TRIM38O00635 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.04■□□□□ -0
TRIM38O00635 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 BTBD6P1-201ENST00000412176 1267 ntBASIC15.04■□□□□ -0
TRIM38O00635 AC007969.1-201ENST00000433675 447 ntBASIC15.04■□□□□ -0
TRIM38O00635 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.04■□□□□ -0
TRIM38O00635 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.04■□□□□ -0
TRIM38O00635 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.04■□□□□ -0
TRIM38O00635 AP001258.2-201ENST00000529891 490 ntBASIC15.04■□□□□ -0
TRIM38O00635 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.04■□□□□ -0
TRIM38O00635 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM38O00635 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.04■□□□□ -0
TRIM38O00635 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.04■□□□□ -0
TRIM38O00635 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM38O00635 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
TRIM38O00635 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRIM38O00635 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRIM38O00635 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRIM38O00635 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRIM38O00635 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
TRIM38O00635 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.03■□□□□ -0
TRIM38O00635 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
TRIM38O00635 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRIM38O00635 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TRIM38O00635 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRIM38O00635 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms