Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC188H7C350 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC188H7C350 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC188H7C350 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CCDC188H7C350 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CCDC188H7C350 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
CCDC188H7C350 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.5■□□□□ 0.07
CCDC188H7C350 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.5■□□□□ 0.07
CCDC188H7C350 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.5■□□□□ 0.07
CCDC188H7C350 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC188H7C350 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC188H7C350 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC188H7C350 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC188H7C350 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCDC188H7C350 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC188H7C350 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC188H7C350 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CCDC188H7C350 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 CICP8-201ENST00000455800 2813 ntBASIC15.49■□□□□ 0.07
CCDC188H7C350 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC188H7C350 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC188H7C350 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.49■□□□□ 0.07
CCDC188H7C350 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC188H7C350 AC254562.1-201ENST00000417586 456 ntBASIC15.49■□□□□ 0.07
CCDC188H7C350 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.49■□□□□ 0.07
CCDC188H7C350 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC188H7C350 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC188H7C350 AC022616.1-201ENST00000518688 554 ntBASIC15.49■□□□□ 0.07
CCDC188H7C350 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC188H7C350 AC069120.2-201ENST00000524091 540 ntBASIC15.49■□□□□ 0.07
CCDC188H7C350 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 AC027369.6-201ENST00000525520 931 ntBASIC15.49■□□□□ 0.07
CCDC188H7C350 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.49■□□□□ 0.07
CCDC188H7C350 AC092865.5-201ENST00000545435 363 ntBASIC15.49■□□□□ 0.07
CCDC188H7C350 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCDC188H7C350 BX539320.1-201ENST00000623759 877 ntBASIC15.49■□□□□ 0.07
CCDC188H7C350 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC188H7C350 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCDC188H7C350 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC188H7C350 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC188H7C350 HSPA8P5-201ENST00000456928 2069 ntBASIC15.48■□□□□ 0.07
CCDC188H7C350 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC188H7C350 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC188H7C350 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC188H7C350 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC188H7C350 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC188H7C350 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CCDC188H7C350 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC188H7C350 MRPL37P1-201ENST00000592451 1337 ntBASIC15.48■□□□□ 0.07
CCDC188H7C350 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC188H7C350 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC188H7C350 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC188H7C350 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC188H7C350 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC188H7C350 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC188H7C350 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC188H7C350 BTBD7P1-201ENST00000447253 1453 ntBASIC15.48■□□□□ 0.07
CCDC188H7C350 AC003102.2-201ENST00000589195 1469 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms