Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 KLF2P1-201ENST00000447438 1042 ntBASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AC012618.1-201ENST00000461223 412 ntBASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AC125604.1-201ENST00000496255 707 ntBASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 ALG3P1-201ENST00000508806 1114 ntBASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 RNA5SP423-201ENST00000517127 109 ntBASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AC091812.3-201ENST00000621362 345 ntBASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 TSPY26P-202ENST00000565928 3884 ntBASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.79□□□□□ -0.04
TBC1D3FA6NER0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 AC008132.1-202ENST00000342005 1389 ntBASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 AL035414.1-201ENST00000451327 857 ntBASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 CICP12-201ENST00000455801 843 ntBASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 RN7SL720P-201ENST00000488178 304 ntBASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 CHMP4BP1-201ENST00000556017 588 ntBASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 AC079328.1-201ENST00000560358 952 ntBASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 SNORD3B-2-202ENST00000571722 791 ntBASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 AC005962.1-201ENST00000584100 773 ntBASIC14.78□□□□□ -0.04
TBC1D3FA6NER0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms