Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 HILS1-202ENST00000545329 423 ntBASIC14.15□□□□□ -0.14
LRIT2A6NDA9 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 AC023908.3-201ENST00000564211 3047 ntBASIC14.15□□□□□ -0.14
LRIT2A6NDA9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 AC007191.1-201ENST00000623179 2995 ntBASIC14.15□□□□□ -0.14
LRIT2A6NDA9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRIT2A6NDA9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LRIT2A6NDA9 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
LRIT2A6NDA9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
LRIT2A6NDA9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 AC022210.1-201ENST00000449856 793 ntBASIC14.14□□□□□ -0.15
LRIT2A6NDA9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 AC022447.6-201ENST00000515522 438 ntBASIC14.14□□□□□ -0.15
LRIT2A6NDA9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 AC023310.1-201ENST00000554836 735 ntBASIC14.14□□□□□ -0.15
LRIT2A6NDA9 MIR4683-201ENST00000579659 81 ntBASIC14.14□□□□□ -0.15
LRIT2A6NDA9 ZACNP1-201ENST00000612259 710 ntBASIC14.14□□□□□ -0.15
LRIT2A6NDA9 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 AP001002.3-201ENST00000623482 206 ntBASIC14.14□□□□□ -0.15
LRIT2A6NDA9 AC002472.3-201ENST00000640124 621 ntBASIC14.14□□□□□ -0.15
LRIT2A6NDA9 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 MIR600HG-201ENST00000449175 5984 ntBASIC14.14□□□□□ -0.15
LRIT2A6NDA9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 AL161772.1-201ENST00000610494 4412 ntBASIC14.14□□□□□ -0.15
LRIT2A6NDA9 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRIT2A6NDA9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 AC015656.1-201ENST00000624209 3578 ntBASIC14.13□□□□□ -0.15
LRIT2A6NDA9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRIT2A6NDA9 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms