Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AL109954.1-202ENST00000564051 2148 ntBASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 AC097724.1-201ENST00000609581 426 ntBASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 AC087481.3-201ENST00000602886 1894 ntBASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 INE2-201ENST00000630399 1874 ntBASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 LILRP1-201ENST00000444199 1370 ntBASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1G3Q9Y6M4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 MAGEA5-201ENST00000446757 942 ntBASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 AC016629.1-201ENST00000596579 586 ntBASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 AC090164.2-201ENST00000611487 516 ntBASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 AC138035.3-201ENST00000622706 2791 ntBASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 AL161772.1-201ENST00000610494 4412 ntBASIC14.57□□□□□ -0.08
CSNK1G3Q9Y6M4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1G3Q9Y6M4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.56□□□□□ -0.08
CSNK1G3Q9Y6M4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CSNK1G3Q9Y6M4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1G3Q9Y6M4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
CSNK1G3Q9Y6M4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1G3Q9Y6M4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.56□□□□□ -0.08
CSNK1G3Q9Y6M4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CSNK1G3Q9Y6M4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms