Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CTBP2P3-201ENST00000585629 1255 ntBASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 CU634019.7-201ENST00000624153 1185 ntBASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 FP236241.2-201ENST00000624906 1185 ntBASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHGA11Q9Y5H2 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.52□□□□□ -0.08
PCDHGA11Q9Y5H2 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGA11Q9Y5H2 AC055811.4-201ENST00000624039 1754 ntBASIC14.52□□□□□ -0.08
PCDHGA11Q9Y5H2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDHGA11Q9Y5H2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDHGA11Q9Y5H2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
PCDHGA11Q9Y5H2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 AC190387.1-201ENST00000551683 408 ntBASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 TP53TG3HP-202ENST00000569755 579 ntBASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 AC009486.1-201ENST00000569860 813 ntBASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 WFDC1-204ENST00000613603 549 ntBASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDHGA11Q9Y5H2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDHGA11Q9Y5H2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms