Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
DKK4Q9UBT3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
DKK4Q9UBT3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
DKK4Q9UBT3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
DKK4Q9UBT3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.6□□□□□ -0.23
DKK4Q9UBT3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
DKK4Q9UBT3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 RNVU1-8-201ENST00000364272 125 ntBASIC13.59□□□□□ -0.23
DKK4Q9UBT3 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 TREHP1-201ENST00000531328 465 ntBASIC13.59□□□□□ -0.23
DKK4Q9UBT3 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 AC124068.2-201ENST00000569473 1109 ntBASIC13.59□□□□□ -0.23
DKK4Q9UBT3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 AC008972.2-201ENST00000606587 494 ntBASIC13.59□□□□□ -0.23
DKK4Q9UBT3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 AC233280.19-201ENST00000633223 136 ntBASIC13.59□□□□□ -0.23
DKK4Q9UBT3 AP000769.1-203ENST00000637245 208 ntBASIC13.59□□□□□ -0.23
DKK4Q9UBT3 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 PCDHA1-201ENST00000378133 2726 ntBASIC13.59□□□□□ -0.23
DKK4Q9UBT3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
DKK4Q9UBT3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
DKK4Q9UBT3 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
DKK4Q9UBT3 LILRP1-201ENST00000444199 1370 ntBASIC13.58□□□□□ -0.23
DKK4Q9UBT3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
DKK4Q9UBT3 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
DKK4Q9UBT3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
DKK4Q9UBT3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
DKK4Q9UBT3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
DKK4Q9UBT3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 AC108734.2-201ENST00000420887 1069 ntBASIC13.58□□□□□ -0.24
DKK4Q9UBT3 CHCHD2P2-201ENST00000503744 321 ntBASIC13.58□□□□□ -0.24
DKK4Q9UBT3 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 AC092862.1-201ENST00000541534 533 ntBASIC13.58□□□□□ -0.24
DKK4Q9UBT3 KNOP1P1-201ENST00000542108 989 ntBASIC13.58□□□□□ -0.24
DKK4Q9UBT3 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 MED11-202ENST00000573708 802 ntTSL 2 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 AC011462.4-201ENST00000616866 449 ntBASIC13.58□□□□□ -0.24
DKK4Q9UBT3 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
DKK4Q9UBT3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms