Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SSU72Q9NP77 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SSU72Q9NP77 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSU72Q9NP77 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSU72Q9NP77 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SSU72Q9NP77 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSU72Q9NP77 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSU72Q9NP77 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SSU72Q9NP77 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.77□□□□□ -0.05
SSU72Q9NP77 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SSU72Q9NP77 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSU72Q9NP77 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.77□□□□□ -0.05
SSU72Q9NP77 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSU72Q9NP77 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.77□□□□□ -0.05
SSU72Q9NP77 SORD2P-201ENST00000558556 1069 ntBASIC14.77□□□□□ -0.05
SSU72Q9NP77 AC103988.2-201ENST00000561804 725 ntBASIC14.77□□□□□ -0.05
SSU72Q9NP77 AL844908.2-201ENST00000609461 460 ntBASIC14.77□□□□□ -0.05
SSU72Q9NP77 AC073592.8-201ENST00000624126 511 ntBASIC14.77□□□□□ -0.05
SSU72Q9NP77 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
SSU72Q9NP77 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.77□□□□□ -0.05
SSU72Q9NP77 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.77□□□□□ -0.05
SSU72Q9NP77 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SSU72Q9NP77 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSU72Q9NP77 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSU72Q9NP77 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSU72Q9NP77 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSU72Q9NP77 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SSU72Q9NP77 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSU72Q9NP77 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 AC092865.5-201ENST00000545435 363 ntBASIC14.76□□□□□ -0.05
SSU72Q9NP77 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 BX539320.1-201ENST00000623759 877 ntBASIC14.76□□□□□ -0.05
SSU72Q9NP77 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 AC004241.5-201ENST00000623870 2448 ntBASIC14.76□□□□□ -0.05
SSU72Q9NP77 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 COL6A4P2-202ENST00000504443 2753 ntBASIC14.76□□□□□ -0.05
SSU72Q9NP77 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 NCLP1-201ENST00000445357 1963 ntBASIC14.76□□□□□ -0.05
SSU72Q9NP77 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSU72Q9NP77 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SSU72Q9NP77 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSU72Q9NP77 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.75□□□□□ -0.05
SSU72Q9NP77 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms