Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 AC136604.1-201ENST00000418535 575 ntBASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 AC098850.1-201ENST00000419919 790 ntBASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 KRT18P64-201ENST00000434946 1219 ntBASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 KRT17P7-201ENST00000451704 1104 ntBASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 TMEM198B-204ENST00000484016 896 ntBASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 ELK1P1-201ENST00000485699 580 ntBASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 RRP7BP-205ENST00000566851 833 ntBASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.16□□□□□ -0.14
TUBA1CQ9BQE3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 AC055811.4-201ENST00000624039 1754 ntBASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 AL607033.1-201ENST00000623900 1599 ntBASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 RN7SL752P-201ENST00000463779 287 ntBASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 SLED1-202ENST00000512051 380 ntBASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 CTBP2P3-201ENST00000585629 1255 ntBASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 AC097359.3-201ENST00000603982 1210 ntBASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 MIR8072-201ENST00000614241 80 ntBASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 AL158212.4-201ENST00000624062 1286 ntBASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TUBA1CQ9BQE3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.14□□□□□ -0.15
TUBA1CQ9BQE3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TUBA1CQ9BQE3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TUBA1CQ9BQE3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TUBA1CQ9BQE3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TUBA1CQ9BQE3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TUBA1CQ9BQE3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TUBA1CQ9BQE3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TUBA1CQ9BQE3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms