Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 HLA-V-204ENST00000476601 1289 ntBASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 AL512361.1-201ENST00000554200 418 ntBASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 AL109936.8-201ENST00000641772 604 ntBASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CMSS1Q9BQ75 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CMSS1Q9BQ75 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CMSS1Q9BQ75 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
CMSS1Q9BQ75 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CMSS1Q9BQ75 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CMSS1Q9BQ75 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CMSS1Q9BQ75 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.83□□□□□ -0.35
CMSS1Q9BQ75 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
CMSS1Q9BQ75 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
CMSS1Q9BQ75 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 AL118506.1-201ENST00000601296 3082 ntBASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 SDHAP3-202ENST00000515467 728 ntBASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 AL512356.2-201ENST00000546955 174 ntBASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 AC051619.7-201ENST00000568314 623 ntBASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 AC055811.4-201ENST00000624039 1754 ntBASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 AL360270.3-201ENST00000609118 1348 ntBASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 AC152010.1-201ENST00000415779 2006 ntBASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CMSS1Q9BQ75 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CMSS1Q9BQ75 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms