Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 BNIP3P42-201ENST00000454982 569 ntBASIC14.07□□□□□ -0.16
TREX2Q9BQ50 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 BNIP3P29-201ENST00000598302 571 ntBASIC14.07□□□□□ -0.16
TREX2Q9BQ50 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 AC011447.5-201ENST00000616168 564 ntBASIC14.07□□□□□ -0.16
TREX2Q9BQ50 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 GRK6P1-201ENST00000400595 1711 ntBASIC14.07□□□□□ -0.16
TREX2Q9BQ50 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TREX2Q9BQ50 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 LINC01230-201ENST00000625222 3017 ntBASIC14.06□□□□□ -0.16
TREX2Q9BQ50 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 NUS1P3-201ENST00000423502 862 ntBASIC14.06□□□□□ -0.16
TREX2Q9BQ50 KRT43P-201ENST00000434019 910 ntBASIC14.06□□□□□ -0.16
TREX2Q9BQ50 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 CROCCP4-201ENST00000457096 498 ntBASIC14.06□□□□□ -0.16
TREX2Q9BQ50 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 AL583810.1-201ENST00000553344 1045 ntBASIC14.06□□□□□ -0.16
TREX2Q9BQ50 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 BRI3BPP1-201ENST00000594224 787 ntBASIC14.06□□□□□ -0.16
TREX2Q9BQ50 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 MIR6869-201ENST00000619434 62 ntBASIC14.06□□□□□ -0.16
TREX2Q9BQ50 PRSS30P-206ENST00000641773 873 ntBASIC14.06□□□□□ -0.16
TREX2Q9BQ50 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 AC027601.5-201ENST00000624065 2482 ntBASIC14.06□□□□□ -0.16
TREX2Q9BQ50 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TREX2Q9BQ50 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms