Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN18Q99952 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN18Q99952 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN18Q99952 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN18Q99952 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PTPN18Q99952 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN18Q99952 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN18Q99952 TEKT4P2-202ENST00000559466 1312 ntBASIC16.71■□□□□ 0.27
PTPN18Q99952 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPN18Q99952 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN18Q99952 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PTPN18Q99952 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN18Q99952 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN18Q99952 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPN18Q99952 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PTPN18Q99952 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPN18Q99952 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN18Q99952 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN18Q99952 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN18Q99952 AL357373.1-201ENST00000394974 322 ntBASIC16.71■□□□□ 0.27
PTPN18Q99952 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN18Q99952 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPN18Q99952 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN18Q99952 AC106047.2-201ENST00000511723 743 ntBASIC16.71■□□□□ 0.27
PTPN18Q99952 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PTPN18Q99952 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN18Q99952 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PTPN18Q99952 AP005212.2-201ENST00000584979 510 ntBASIC16.71■□□□□ 0.27
PTPN18Q99952 AC010632.2-201ENST00000588369 1224 ntBASIC16.71■□□□□ 0.27
PTPN18Q99952 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PTPN18Q99952 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPN18Q99952 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN18Q99952 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN18Q99952 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN18Q99952 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN18Q99952 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.71■□□□□ 0.27
PTPN18Q99952 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN18Q99952 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.71■□□□□ 0.27
PTPN18Q99952 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTPN18Q99952 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.71■□□□□ 0.26
PTPN18Q99952 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.71■□□□□ 0.26
PTPN18Q99952 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTPN18Q99952 LTB4R2-202ENST00000528054 3092 ntBASIC16.71■□□□□ 0.26
PTPN18Q99952 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
PTPN18Q99952 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN18Q99952 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN18Q99952 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN18Q99952 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN18Q99952 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
PTPN18Q99952 ACTG1P19-201ENST00000418987 1116 ntBASIC16.7■□□□□ 0.26
PTPN18Q99952 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.7■□□□□ 0.26
PTPN18Q99952 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN18Q99952 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.7■□□□□ 0.26
PTPN18Q99952 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN18Q99952 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.7■□□□□ 0.26
PTPN18Q99952 RN7SL582P-201ENST00000491078 279 ntBASIC16.7■□□□□ 0.26
PTPN18Q99952 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.7■□□□□ 0.26
PTPN18Q99952 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN18Q99952 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.7■□□□□ 0.26
PTPN18Q99952 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN18Q99952 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
PTPN18Q99952 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.7■□□□□ 0.26
PTPN18Q99952 C18orf15-201ENST00000623680 2534 ntBASIC16.7■□□□□ 0.26
PTPN18Q99952 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN18Q99952 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN18Q99952 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.7■□□□□ 0.26
PTPN18Q99952 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTPN18Q99952 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN18Q99952 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN18Q99952 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTPN18Q99952 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.69■□□□□ 0.26
PTPN18Q99952 AC092135.3-201ENST00000624151 1846 ntBASIC16.69■□□□□ 0.26
PTPN18Q99952 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms