Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.98□□□□□ -0.49
RNF2Q99496 TARDBPP1-201ENST00000442013 1203 ntBASIC11.98□□□□□ -0.49
RNF2Q99496 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.98□□□□□ -0.49
RNF2Q99496 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.98□□□□□ -0.49
RNF2Q99496 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.98□□□□□ -0.49
RNF2Q99496 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RNF2Q99496 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RNF2Q99496 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF2Q99496 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.98□□□□□ -0.49
RNF2Q99496 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF2Q99496 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.98□□□□□ -0.49
RNF2Q99496 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
RNF2Q99496 AL390754.1-201ENST00000619088 582 ntBASIC11.98□□□□□ -0.49
RNF2Q99496 AL590560.3-201ENST00000623350 461 ntBASIC11.98□□□□□ -0.49
RNF2Q99496 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF2Q99496 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.98□□□□□ -0.49
RNF2Q99496 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
RNF2Q99496 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
RNF2Q99496 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
RNF2Q99496 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF2Q99496 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.98□□□□□ -0.49
RNF2Q99496 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.98□□□□□ -0.49
RNF2Q99496 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF2Q99496 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.98□□□□□ -0.49
RNF2Q99496 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.98□□□□□ -0.49
RNF2Q99496 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF2Q99496 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF2Q99496 AC152010.1-201ENST00000415779 2006 ntBASIC11.98□□□□□ -0.49
RNF2Q99496 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.98□□□□□ -0.49
RNF2Q99496 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
RNF2Q99496 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.98□□□□□ -0.49
RNF2Q99496 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.97□□□□□ -0.49
RNF2Q99496 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.97□□□□□ -0.49
RNF2Q99496 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.97□□□□□ -0.49
RNF2Q99496 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
RNF2Q99496 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.97□□□□□ -0.49
RNF2Q99496 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.97□□□□□ -0.49
RNF2Q99496 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
RNF2Q99496 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.97□□□□□ -0.49
RNF2Q99496 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.97□□□□□ -0.49
RNF2Q99496 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
RNF2Q99496 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.97□□□□□ -0.49
RNF2Q99496 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 AC087499.5-201ENST00000452760 1342 ntBASIC11.97□□□□□ -0.49
RNF2Q99496 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
RNF2Q99496 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.97□□□□□ -0.49
RNF2Q99496 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
RNF2Q99496 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.97□□□□□ -0.49
RNF2Q99496 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.97□□□□□ -0.49
RNF2Q99496 AC055876.3-201ENST00000431496 288 ntBASIC11.97□□□□□ -0.49
RNF2Q99496 AC241585.1-201ENST00000433527 519 ntBASIC11.97□□□□□ -0.49
RNF2Q99496 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.97□□□□□ -0.49
RNF2Q99496 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.97□□□□□ -0.49
RNF2Q99496 RFPL4AP1-201ENST00000530883 850 ntBASIC11.97□□□□□ -0.49
RNF2Q99496 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.97□□□□□ -0.49
RNF2Q99496 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.97□□□□□ -0.49
RNF2Q99496 AC010336.2-201ENST00000564226 506 ntBASIC11.97□□□□□ -0.49
RNF2Q99496 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.97□□□□□ -0.49
RNF2Q99496 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.97□□□□□ -0.49
RNF2Q99496 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.97□□□□□ -0.49
RNF2Q99496 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.97□□□□□ -0.49
RNF2Q99496 AC138649.4-201ENST00000612222 287 ntBASIC11.97□□□□□ -0.49
RNF2Q99496 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.97□□□□□ -0.49
RNF2Q99496 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
RNF2Q99496 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.97□□□□□ -0.49
RNF2Q99496 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
RNF2Q99496 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
RNF2Q99496 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.97□□□□□ -0.49
RNF2Q99496 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
RNF2Q99496 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms