Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 AC092978.1-202ENST00000637590 1327 ntBASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 AC008267.1-201ENST00000474858 1069 ntBASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 AC140658.4-201ENST00000561990 352 ntBASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 AC021016.3-201ENST00000608367 477 ntBASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP2Q96SN8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 AL390755.1-201ENST00000623716 2027 ntBASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 RPL18AP3-201ENST00000462885 528 ntBASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 KLF17P1-201ENST00000547105 1126 ntBASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP2Q96SN8 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 MIR645-201ENST00000385283 94 ntBASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 RPL17P11-201ENST00000417593 544 ntBASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 AC005586.2-201ENST00000563946 837 ntBASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 AC104506.1-201ENST00000609247 429 ntBASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 AL805961.1-201ENST00000642026 753 ntBASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK5RAP2Q96SN8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms