Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 UPF3AP3-201ENST00000420996 769 ntBASIC12.15□□□□□ -0.46
RAB40CQ96S21 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 RPL13P2-201ENST00000440687 659 ntBASIC12.15□□□□□ -0.46
RAB40CQ96S21 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 AC092865.5-201ENST00000545435 363 ntBASIC12.15□□□□□ -0.46
RAB40CQ96S21 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 MIR4469-201ENST00000583919 79 ntBASIC12.15□□□□□ -0.46
RAB40CQ96S21 AC010327.4-202ENST00000591484 748 ntBASIC12.15□□□□□ -0.46
RAB40CQ96S21 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 AC007967.4-201ENST00000614700 386 ntBASIC12.15□□□□□ -0.46
RAB40CQ96S21 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
RAB40CQ96S21 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
RAB40CQ96S21 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
RAB40CQ96S21 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
RAB40CQ96S21 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
RAB40CQ96S21 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
RAB40CQ96S21 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 AC073548.1-201ENST00000624088 1882 ntBASIC12.14□□□□□ -0.47
RAB40CQ96S21 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 CICP20-201ENST00000443330 2801 ntBASIC12.14□□□□□ -0.47
RAB40CQ96S21 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 MTND6P24-201ENST00000440466 518 ntBASIC12.14□□□□□ -0.47
RAB40CQ96S21 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 AC025048.3-201ENST00000590609 569 ntBASIC12.14□□□□□ -0.47
RAB40CQ96S21 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 AC005702.4-201ENST00000618393 416 ntBASIC12.14□□□□□ -0.47
RAB40CQ96S21 LINC00628-201ENST00000628516 1289 ntBASIC12.14□□□□□ -0.47
RAB40CQ96S21 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.14□□□□□ -0.47
RAB40CQ96S21 AL591122.2-201ENST00000624125 1853 ntBASIC12.14□□□□□ -0.47
RAB40CQ96S21 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RAB40CQ96S21 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 245.3 ms