Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 AC131902.2-201ENST00000566892 2172 ntBASIC11.37□□□□□ -0.59
AP1S3Q96PC3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 AP000350.6-201ENST00000609510 5637 ntBASIC11.37□□□□□ -0.59
AP1S3Q96PC3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 FAM220BP-201ENST00000377689 816 ntBASIC11.37□□□□□ -0.59
AP1S3Q96PC3 HLA-H-201ENST00000383620 1096 ntBASIC11.37□□□□□ -0.59
AP1S3Q96PC3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 Z83851.2-201ENST00000609564 659 ntBASIC11.37□□□□□ -0.59
AP1S3Q96PC3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 AL136982.4-201ENST00000437689 1740 ntBASIC11.37□□□□□ -0.59
AP1S3Q96PC3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 AKAP8P1-201ENST00000434743 1349 ntBASIC11.36□□□□□ -0.59
AP1S3Q96PC3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 AC004870.1-201ENST00000315132 882 ntBASIC11.36□□□□□ -0.59
AP1S3Q96PC3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 UNC93B7-201ENST00000509439 705 ntBASIC11.36□□□□□ -0.59
AP1S3Q96PC3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 HNRNPUP1-201ENST00000554987 333 ntBASIC11.36□□□□□ -0.59
AP1S3Q96PC3 AC011467.4-201ENST00000594891 528 ntBASIC11.36□□□□□ -0.59
AP1S3Q96PC3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 AL049840.3-201ENST00000602669 611 ntBASIC11.36□□□□□ -0.59
AP1S3Q96PC3 AC116407.3-201ENST00000623905 1129 ntBASIC11.36□□□□□ -0.59
AP1S3Q96PC3 AC008267.7-201ENST00000624570 1194 ntBASIC11.36□□□□□ -0.59
AP1S3Q96PC3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.36□□□□□ -0.59
AP1S3Q96PC3 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms