Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 KHSRPP1-201ENST00000427983 1768 ntBASIC15.68■□□□□ 0.1
CASD1Q96PB1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 AC114947.1-202ENST00000514136 344 ntBASIC15.68■□□□□ 0.1
CASD1Q96PB1 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 AC124068.2-201ENST00000569473 1109 ntBASIC15.68■□□□□ 0.1
CASD1Q96PB1 RPL17P45-201ENST00000586289 509 ntBASIC15.68■□□□□ 0.1
CASD1Q96PB1 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASD1Q96PB1 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CASD1Q96PB1 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 AL627422.1-201ENST00000434104 580 ntBASIC15.67■□□□□ 0.1
CASD1Q96PB1 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 AC007326.1-201ENST00000604539 458 ntBASIC15.67■□□□□ 0.1
CASD1Q96PB1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 LINC00554-201ENST00000564841 3011 ntBASIC15.67■□□□□ 0.1
CASD1Q96PB1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.67■□□□□ 0.1
CASD1Q96PB1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASD1Q96PB1 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASD1Q96PB1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASD1Q96PB1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASD1Q96PB1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASD1Q96PB1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASD1Q96PB1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASD1Q96PB1 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.66■□□□□ 0.1
CASD1Q96PB1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASD1Q96PB1 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.66■□□□□ 0.1
CASD1Q96PB1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.66■□□□□ 0.1
CASD1Q96PB1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASD1Q96PB1 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASD1Q96PB1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASD1Q96PB1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.66■□□□□ 0.1
CASD1Q96PB1 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASD1Q96PB1 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.66■□□□□ 0.1
CASD1Q96PB1 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.66■□□□□ 0.1
CASD1Q96PB1 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms