Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 TREHP1-201ENST00000531328 465 ntBASIC17.09■□□□□ 0.33
CDCA5Q96FF9 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 AC010632.2-201ENST00000588369 1224 ntBASIC17.09■□□□□ 0.33
CDCA5Q96FF9 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCA5Q96FF9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CDCA5Q96FF9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDCA5Q96FF9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDCA5Q96FF9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CDCA5Q96FF9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CDCA5Q96FF9 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.08■□□□□ 0.33
CDCA5Q96FF9 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDCA5Q96FF9 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.08■□□□□ 0.33
CDCA5Q96FF9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.08■□□□□ 0.33
CDCA5Q96FF9 AC092135.3-201ENST00000624151 1846 ntBASIC17.08■□□□□ 0.33
CDCA5Q96FF9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDCA5Q96FF9 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 AC010976.2-201ENST00000609697 852 ntBASIC17.08■□□□□ 0.32
CDCA5Q96FF9 LINC00244-201ENST00000625073 613 ntBASIC17.08■□□□□ 0.32
CDCA5Q96FF9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 AC023024.2-201ENST00000623561 1993 ntBASIC17.08■□□□□ 0.32
CDCA5Q96FF9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.08■□□□□ 0.32
CDCA5Q96FF9 BRD7P5-201ENST00000299197 1822 ntBASIC17.07■□□□□ 0.32
CDCA5Q96FF9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 MIR566-201ENST00000385187 94 ntBASIC17.07■□□□□ 0.32
CDCA5Q96FF9 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 ACTG1P19-201ENST00000418987 1116 ntBASIC17.07■□□□□ 0.32
CDCA5Q96FF9 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 MIR6746-201ENST00000620971 63 ntBASIC17.07■□□□□ 0.32
CDCA5Q96FF9 ST5-261ENST00000626808 1071 ntTSL 5 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 LINC01101-201ENST00000622953 1884 ntBASIC17.07■□□□□ 0.32
CDCA5Q96FF9 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.07■□□□□ 0.32
CDCA5Q96FF9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA5Q96FF9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA5Q96FF9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA5Q96FF9 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA5Q96FF9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.06■□□□□ 0.32
CDCA5Q96FF9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDCA5Q96FF9 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDCA5Q96FF9 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms