Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 MTX1P1-201ENST00000440904 838 ntBASIC15.78■□□□□ 0.12
ATP2A3Q93084 HOMER2P2-201ENST00000451621 847 ntBASIC15.78■□□□□ 0.12
ATP2A3Q93084 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 MIR3615-201ENST00000581999 87 ntBASIC15.78■□□□□ 0.12
ATP2A3Q93084 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 AL606495.2-201ENST00000605867 535 ntBASIC15.78■□□□□ 0.12
ATP2A3Q93084 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.78■□□□□ 0.12
ATP2A3Q93084 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.78■□□□□ 0.12
ATP2A3Q93084 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ATP2A3Q93084 KRT8P14-201ENST00000414254 1442 ntBASIC15.77■□□□□ 0.12
ATP2A3Q93084 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 AL158070.2-201ENST00000623713 1621 ntBASIC15.77■□□□□ 0.12
ATP2A3Q93084 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 AP001258.2-201ENST00000529891 490 ntBASIC15.77■□□□□ 0.12
ATP2A3Q93084 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATP2A3Q93084 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 ENPP7P14-201ENST00000621765 1040 ntBASIC15.77■□□□□ 0.12
ATP2A3Q93084 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.77■□□□□ 0.12
ATP2A3Q93084 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
ATP2A3Q93084 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
ATP2A3Q93084 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP2A3Q93084 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP2A3Q93084 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
ATP2A3Q93084 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP2A3Q93084 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ATP2A3Q93084 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
ATP2A3Q93084 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP2A3Q93084 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.77■□□□□ 0.11
ATP2A3Q93084 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.77■□□□□ 0.11
ATP2A3Q93084 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP2A3Q93084 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
ATP2A3Q93084 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP2A3Q93084 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ATP2A3Q93084 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.77■□□□□ 0.11
ATP2A3Q93084 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.77■□□□□ 0.11
ATP2A3Q93084 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP2A3Q93084 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.76■□□□□ 0.11
ATP2A3Q93084 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP2A3Q93084 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.76■□□□□ 0.11
ATP2A3Q93084 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP2A3Q93084 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
ATP2A3Q93084 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP2A3Q93084 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP2A3Q93084 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP2A3Q93084 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP2A3Q93084 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP2A3Q93084 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ATP2A3Q93084 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
ATP2A3Q93084 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP2A3Q93084 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP2A3Q93084 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
ATP2A3Q93084 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms