Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.98■□□□□ 0.31
ERCC4Q92889 AL049840.4-201ENST00000602422 811 ntBASIC16.98■□□□□ 0.31
ERCC4Q92889 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.98■□□□□ 0.31
ERCC4Q92889 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.98■□□□□ 0.31
ERCC4Q92889 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ERCC4Q92889 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ERCC4Q92889 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.98■□□□□ 0.31
ERCC4Q92889 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ERCC4Q92889 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
ERCC4Q92889 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.98■□□□□ 0.31
ERCC4Q92889 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ERCC4Q92889 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.98■□□□□ 0.31
ERCC4Q92889 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.98■□□□□ 0.31
ERCC4Q92889 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.98■□□□□ 0.31
ERCC4Q92889 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.97■□□□□ 0.31
ERCC4Q92889 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
ERCC4Q92889 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
ERCC4Q92889 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.97■□□□□ 0.31
ERCC4Q92889 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ERCC4Q92889 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ERCC4Q92889 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.97■□□□□ 0.31
ERCC4Q92889 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.97■□□□□ 0.31
ERCC4Q92889 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.97■□□□□ 0.31
ERCC4Q92889 GNAQP1-201ENST00000444815 1067 ntBASIC16.97■□□□□ 0.31
ERCC4Q92889 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.97■□□□□ 0.31
ERCC4Q92889 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.97■□□□□ 0.31
ERCC4Q92889 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.97■□□□□ 0.31
ERCC4Q92889 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.97■□□□□ 0.31
ERCC4Q92889 PTENP1-202ENST00000532280 3996 ntBASIC16.97■□□□□ 0.31
ERCC4Q92889 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
ERCC4Q92889 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.97■□□□□ 0.31
ERCC4Q92889 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ERCC4Q92889 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.96■□□□□ 0.31
ERCC4Q92889 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.96■□□□□ 0.31
ERCC4Q92889 AC092135.3-201ENST00000624151 1846 ntBASIC16.96■□□□□ 0.31
ERCC4Q92889 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ERCC4Q92889 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ERCC4Q92889 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.96■□□□□ 0.31
ERCC4Q92889 AC055876.3-201ENST00000431496 288 ntBASIC16.96■□□□□ 0.31
ERCC4Q92889 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.96■□□□□ 0.31
ERCC4Q92889 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 AC026410.3-201ENST00000514280 936 ntBASIC16.96■□□□□ 0.31
ERCC4Q92889 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 AC022447.6-201ENST00000515522 438 ntBASIC16.96■□□□□ 0.31
ERCC4Q92889 AC138649.4-201ENST00000612222 287 ntBASIC16.96■□□□□ 0.31
ERCC4Q92889 MIR8072-201ENST00000614241 80 ntBASIC16.96■□□□□ 0.31
ERCC4Q92889 AC093512.1-201ENST00000617969 520 ntBASIC16.96■□□□□ 0.31
ERCC4Q92889 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.96■□□□□ 0.31
ERCC4Q92889 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ERCC4Q92889 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
ERCC4Q92889 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.96■□□□□ 0.31
ERCC4Q92889 AC022144.1-201ENST00000602255 1580 ntBASIC16.96■□□□□ 0.31
ERCC4Q92889 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ERCC4Q92889 AC055811.4-201ENST00000624039 1754 ntBASIC16.96■□□□□ 0.31
ERCC4Q92889 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
ERCC4Q92889 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ERCC4Q92889 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ERCC4Q92889 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
ERCC4Q92889 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.96■□□□□ 0.31
ERCC4Q92889 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ERCC4Q92889 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms