Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.04■□□□□ 0.32
U2AF1L4Q8WU68 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.04■□□□□ 0.32
U2AF1L4Q8WU68 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.04■□□□□ 0.32
U2AF1L4Q8WU68 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
U2AF1L4Q8WU68 AC126755.1-201ENST00000525846 6405 ntBASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 AC004066.1-201ENST00000502488 802 ntBASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 AC100827.2-201ENST00000563214 1194 ntBASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 SNORD3B-2-202ENST00000571722 791 ntBASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
U2AF1L4Q8WU68 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 AC074138.1-201ENST00000611182 1303 ntBASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 AC006058.4-201ENST00000624016 1670 ntBASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 RPS9P1-201ENST00000419943 583 ntBASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 AC022616.1-201ENST00000518688 554 ntBASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 DNM1P30-201ENST00000563586 452 ntBASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 MIR4783-201ENST00000580343 82 ntBASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 AC138466.3-201ENST00000619983 221 ntBASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
U2AF1L4Q8WU68 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
U2AF1L4Q8WU68 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
U2AF1L4Q8WU68 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
U2AF1L4Q8WU68 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
U2AF1L4Q8WU68 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
U2AF1L4Q8WU68 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
U2AF1L4Q8WU68 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.02■□□□□ 0.31
U2AF1L4Q8WU68 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.02■□□□□ 0.31
U2AF1L4Q8WU68 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
U2AF1L4Q8WU68 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.31
U2AF1L4Q8WU68 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
U2AF1L4Q8WU68 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
U2AF1L4Q8WU68 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.01■□□□□ 0.31
U2AF1L4Q8WU68 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms