Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC009093.2-202ENST00000620513 2079 ntBASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 AL590640.2-201ENST00000457038 527 ntBASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 BTNL10-201ENST00000595971 695 ntBASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 AC233724.13-201ENST00000598383 410 ntBASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDH19Q8TAB3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 MYO15B-237ENST00000642007 4893 ntBASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 TPM3P8-201ENST00000330554 643 ntBASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 KRT43P-201ENST00000434019 910 ntBASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 RPS2P32-201ENST00000439199 892 ntBASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 AP003171.2-201ENST00000528208 925 ntBASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 SNX29P1-201ENST00000548357 1007 ntBASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 AC106820.3-201ENST00000561653 397 ntBASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 AC244669.2-201ENST00000612320 853 ntBASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDH19Q8TAB3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms