Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.58□□□□□ -0.08
HIPK4Q8NE63 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 AC007787.1-201ENST00000588095 1583 ntBASIC14.57□□□□□ -0.08
HIPK4Q8NE63 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.57□□□□□ -0.08
HIPK4Q8NE63 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 POLD2P1-201ENST00000511220 997 ntBASIC14.57□□□□□ -0.08
HIPK4Q8NE63 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 NUTM2HP-201ENST00000442076 2498 ntBASIC14.57□□□□□ -0.08
HIPK4Q8NE63 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HIPK4Q8NE63 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 TPT1P11-201ENST00000458482 498 ntBASIC14.56□□□□□ -0.08
HIPK4Q8NE63 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 AC003101.2-201ENST00000612557 442 ntBASIC14.56□□□□□ -0.08
HIPK4Q8NE63 AL513210.1-201ENST00000629608 234 ntBASIC14.56□□□□□ -0.08
HIPK4Q8NE63 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HIPK4Q8NE63 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms