Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 KRT8P14-201ENST00000414254 1442 ntBASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AC018529.2-202ENST00000611482 3087 ntBASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 RNU1-114P-201ENST00000365297 166 ntBASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AC002472.2-201ENST00000442739 958 ntBASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 MYCLP2-201ENST00000449268 967 ntBASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 ELK1P1-201ENST00000485699 580 ntBASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AP001582.1-201ENST00000525856 295 ntBASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 DUX4L47-201ENST00000566374 394 ntBASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.42□□□□□ -0.42
ZNF439Q8NDP4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 AC023090.2-201ENST00000625182 2110 ntBASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 MTHFR-210ENST00000641407 2387 ntBASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF439Q8NDP4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms