Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
VPS8Q8N3P4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 AC106881.1-201ENST00000605849 3329 ntBASIC22.86■■□□□ 1.25
VPS8Q8N3P4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 LAP3P2-201ENST00000454686 1454 ntBASIC22.86■■□□□ 1.25
VPS8Q8N3P4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 AC239868.1-201ENST00000369385 493 ntBASIC22.86■■□□□ 1.25
VPS8Q8N3P4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC22.86■■□□□ 1.25
VPS8Q8N3P4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 BX640514.1-201ENST00000583223 1918 ntBASIC22.85■■□□□ 1.25
VPS8Q8N3P4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
VPS8Q8N3P4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 IMP3P2-201ENST00000489760 475 ntBASIC22.84■■□□□ 1.25
VPS8Q8N3P4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 AC242376.1-201ENST00000559033 726 ntBASIC22.84■■□□□ 1.25
VPS8Q8N3P4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
VPS8Q8N3P4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 AC093752.3-201ENST00000567343 901 ntBASIC22.83■■□□□ 1.25
VPS8Q8N3P4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
VPS8Q8N3P4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC22.83■■□□□ 1.24
VPS8Q8N3P4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
VPS8Q8N3P4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms