Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 AC136604.1-201ENST00000418535 575 ntBASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 AC073648.2-201ENST00000510116 352 ntBASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 HNRNPUP1-201ENST00000554987 333 ntBASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 AC011498.7-201ENST00000624986 2027 ntBASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 AC012508.2-201ENST00000567613 1472 ntBASIC13.55□□□□□ -0.24
CROCCP3Q8IVE0 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CROCCP3Q8IVE0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms